RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	TNP1	P09430	55 aa		3.2	□□□□□ -1.9
SPTAN1-238	ENST00000637903	ROMO1	P60602	79 aa		3.15	□□□□□ -1.91
SPTAN1-238	ENST00000637903	KRTAP25-1	Q3LHN0	102 aa		3.14	□□□□□ -1.91
SPTAN1-238	ENST00000637903	LCE5A	Q5TCM9	118 aa		3.14	□□□□□ -1.91
SPTAN1-238	ENST00000637903	KRTAP4-9	Q9BYQ8	210 aa		3.13	□□□□□ -1.91
SPTAN1-238	ENST00000637903	KRTAP23-1	A1A580	65 aa		3.12	□□□□□ -1.91
SPTAN1-238	ENST00000637903	KRTAP19-7	Q3SYF9	63 aa		3.11	□□□□□ -1.91
SPTAN1-238	ENST00000637903	LCE3A	Q5TA76	89 aa		3.09	□□□□□ -1.91
SPTAN1-238	ENST00000637903	KRTAP19-3	Q7Z4W3	81 aa		3.09	□□□□□ -1.91
SPTAN1-238	ENST00000637903	GPR98	Q8WXG9	6306 aa		3.08	□□□□□ -1.92
SPTAN1-238	ENST00000637903	MT1E	P04732	61 aa		3.08	□□□□□ -1.92
SPTAN1-238	ENST00000637903	DST	Q03001	7570 aa	Known RBP	3.07	□□□□□ -1.92
SPTAN1-238	ENST00000637903	PRO0628	Q9UI54	55 aa		3.07	□□□□□ -1.92
SPTAN1-238	ENST00000637903	PMAIP1	Q13794	54 aa		3.06	□□□□□ -1.92
SPTAN1-238	ENST00000637903	LCE1D	Q5T752	114 aa		3.05	□□□□□ -1.92
SPTAN1-238	ENST00000637903	KRTAP19-5	Q3LI72	72 aa		3.03	□□□□□ -1.92
SPTAN1-238	ENST00000637903	LCE4A	Q5TA78	99 aa		3.01	□□□□□ -1.93
SPTAN1-238	ENST00000637903	MT1G	P13640	62 aa		3	□□□□□ -1.93
SPTAN1-238	ENST00000637903	PP632	Q6XCG6	107 aa		2.99	□□□□□ -1.93
SPTAN1-238	ENST00000637903	MT4	P47944	62 aa		2.97	□□□□□ -1.93
SPTAN1-238	ENST00000637903	KRTAP12-3	P60328	96 aa		2.97	□□□□□ -1.93
SPTAN1-238	ENST00000637903	LOC100996750	A0A140TA64	210 aa		2.96	□□□□□ -1.94
SPTAN1-238	ENST00000637903	KRTAP4-6	Q9BYQ5	205 aa		2.96	□□□□□ -1.94
SPTAN1-238	ENST00000637903	HMCN1	Q96RW7	5635 aa		2.95	□□□□□ -1.94
SPTAN1-238	ENST00000637903	KRTAP5-10	Q6L8G5	202 aa		2.95	□□□□□ -1.94
SPTAN1-238	ENST00000637903	KRTAP5-4	Q6L8H1	288 aa		2.94	□□□□□ -1.94
SPTAN1-238	ENST00000637903	MT1M	Q8N339	61 aa		2.94	□□□□□ -1.94
SPTAN1-238	ENST00000637903	MT1L	Q93083	61 aa		2.91	□□□□□ -1.94
SPTAN1-238	ENST00000637903	AHNAK2	Q8IVF2	5795 aa		2.89	□□□□□ -1.95
SPTAN1-238	ENST00000637903	PRAC1	Q96KF2	57 aa		2.89	□□□□□ -1.95
SPTAN1-238	ENST00000637903	KRTAP15-1	Q3LI76	137 aa		2.87	□□□□□ -1.95
SPTAN1-238	ENST00000637903	KTN1-AS1	Q86SY8	53 aa		2.87	□□□□□ -1.95
SPTAN1-238	ENST00000637903	KRTAP4-3	Q9BYR4	195 aa		2.87	□□□□□ -1.95
SPTAN1-238	ENST00000637903	KRTAP5-7	Q6L8G8	165 aa		2.86	□□□□□ -1.95
SPTAN1-238	ENST00000637903	KRTAP5-3	Q6L8H2	238 aa		2.82	□□□□□ -1.96
SPTAN1-238	ENST00000637903	KRTAP19-4	Q3LI73	84 aa		2.81	□□□□□ -1.96
SPTAN1-238	ENST00000637903	KRTAP20-2	Q3LI61	65 aa		2.77	□□□□□ -1.97
SPTAN1-238	ENST00000637903	KRTAP4-7	Q9BYR0	210 aa		2.77	□□□□□ -1.97
SPTAN1-238	ENST00000637903	LCE3C	Q5T5A8	94 aa		2.76	□□□□□ -1.97
SPTAN1-238	ENST00000637903	SPRR5	A0A1B0GTR4	108 aa		2.74	□□□□□ -1.97
SPTAN1-238	ENST00000637903	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.74	□□□□□ -1.97
SPTAN1-238	ENST00000637903	KRTAP12-4	P60329	112 aa		2.69	□□□□□ -1.98
SPTAN1-238	ENST00000637903	KRTAP4-12	Q9BQ66	201 aa		2.63	□□□□□ -1.99
SPTAN1-238	ENST00000637903	KRTAP9-6	A8MVA2	160 aa		2.59	□□□□□ -1.99
SPTAN1-238	ENST00000637903	KRTAP4-11	Q9BYQ6	195 aa		2.58	□□□□□ -2
SPTAN1-238	ENST00000637903	SYNE1	Q8NF91	8797 aa	Known RBP	2.56	□□□□□ -2
SPTAN1-238	ENST00000637903	KRTAP9-9	Q9BYP9	154 aa		2.55	□□□□□ -2
SPTAN1-238	ENST00000637903	KRTAP9-4	Q9BYQ2	154 aa		2.55	□□□□□ -2
SPTAN1-238	ENST00000637903	KRTAP5-2	Q701N4	177 aa		2.54	□□□□□ -2
SPTAN1-238	ENST00000637903	KRTAP5-8	O75690	187 aa		2.5	□□□□□ -2.01
SPTAN1-238	ENST00000637903	MT1A	P04731	61 aa		2.48	□□□□□ -2.01
SPTAN1-238	ENST00000637903	KRTAP6-1	Q3LI64	71 aa		2.47	□□□□□ -2.01
SPTAN1-238	ENST00000637903	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.43	□□□□□ -2.02
SPTAN1-238	ENST00000637903	MUC5AC	P98088	5654 aa		2.4	□□□□□ -2.02
SPTAN1-238	ENST00000637903	LUZP6	Q538Z0	58 aa		2.4	□□□□□ -2.03
SPTAN1-238	ENST00000637903	KRTAP6-2	Q3LI66	62 aa		2.39	□□□□□ -2.03
SPTAN1-238	ENST00000637903	AHNAK	Q09666	5890 aa	Known RBP	2.36	□□□□□ -2.03
SPTAN1-238	ENST00000637903	KRTAP5-1	Q6L8H4	278 aa		2.32	□□□□□ -2.04
SPTAN1-238	ENST00000637903	NDUFAF8	A1L188	74 aa		2.31	□□□□□ -2.04
SPTAN1-238	ENST00000637903	KRTAP4-2	Q9BYR5	136 aa		2.31	□□□□□ -2.04
SPTAN1-238	ENST00000637903	OBSCN	Q5VST9	7968 aa		2.28	□□□□□ -2.04
SPTAN1-238	ENST00000637903	MT3	P25713	68 aa		2.27	□□□□□ -2.05
SPTAN1-238	ENST00000637903	LCE1E	Q5T753	118 aa		2.15	□□□□□ -2.07
SPTAN1-238	ENST00000637903	LCE3D	Q9BYE3	92 aa		2.04	□□□□□ -2.08
SPTAN1-238	ENST00000637903	LCE1F	Q5T754	118 aa		2.03	□□□□□ -2.08
SPTAN1-238	ENST00000637903	LCE1C	Q5T751	118 aa		2	□□□□□ -2.09
SPTAN1-238	ENST00000637903	LCE1B	Q5T7P3	118 aa		2	□□□□□ -2.09
SPTAN1-238	ENST00000637903	LCE3E	Q5T5B0	92 aa		1.97	□□□□□ -2.09
SPTAN1-238	ENST00000637903	KRTAP5-11	Q6L8G4	156 aa		1.83	□□□□□ -2.12
SPTAN1-238	ENST00000637903	INE1	O15225	51 aa		1.81	□□□□□ -2.12
SPTAN1-238	ENST00000637903	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	1.8	□□□□□ -2.12
SPTAN1-238	ENST00000637903	PHGR1	C9JFL3	82 aa		1.7	□□□□□ -2.14
SPTAN1-238	ENST00000637903	KRTAP21-2	Q3LI59	83 aa		1.64	□□□□□ -2.15
SPTAN1-238	ENST00000637903	PRM1	P04553	51 aa		1.63	□□□□□ -2.15
SPTAN1-238	ENST00000637903	KRTAP4-4	Q9BYR3	166 aa		1.5	□□□□□ -2.17
SPTAN1-238	ENST00000637903	MUC19	Q7Z5P9	8384 aa		1.41	□□□□□ -2.18
SPTAN1-238	ENST00000637903	KRTAP21-1	Q3LI58	79 aa		1.31	□□□□□ -2.2
SPTAN1-238	ENST00000637903	MUC16	Q8WXI7	14507 aa		1.02	□□□□□ -2.25

Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms