RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
CTSD-209ENST00000637158 A0A1B0GU33 70 aa6.35□□□□□ -1.39
CTSD-209ENST00000637158 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
CTSD-209ENST00000637158 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
CTSD-209ENST00000637158 KRTAP4-3Q9BYR4 195 aa6.3□□□□□ -1.4
CTSD-209ENST00000637158 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
CTSD-209ENST00000637158 KRTAP5-7Q6L8G8 165 aa6.25□□□□□ -1.41
CTSD-209ENST00000637158 Q1T7F1 81 aa6.24□□□□□ -1.41
CTSD-209ENST00000637158 V9GYY9 64 aa6.24□□□□□ -1.41
CTSD-209ENST00000637158 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
CTSD-209ENST00000637158 TNP1P09430 55 aa6.22□□□□□ -1.41
CTSD-209ENST00000637158 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
CTSD-209ENST00000637158 KRTAP5-3Q6L8H2 238 aa6.2□□□□□ -1.42
CTSD-209ENST00000637158 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
CTSD-209ENST00000637158 A0A1B0GU69 56 aa6.1□□□□□ -1.43
CTSD-209ENST00000637158 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
CTSD-209ENST00000637158 PRR15LQ9BU68 103 aa6.09□□□□□ -1.43
CTSD-209ENST00000637158 PSPHP1O15172 72 aa6.08□□□□□ -1.44
CTSD-209ENST00000637158 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
CTSD-209ENST00000637158 A8MU10 97 aa6.05□□□□□ -1.44
CTSD-209ENST00000637158 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
CTSD-209ENST00000637158 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
CTSD-209ENST00000637158 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
CTSD-209ENST00000637158 KRTAP5-5Q701N2 237 aaPredicted RBP6□□□□□ -1.45
CTSD-209ENST00000637158 UQCR11O14957 56 aa5.92□□□□□ -1.46
CTSD-209ENST00000637158 A6NED7 52 aa5.91□□□□□ -1.46
CTSD-209ENST00000637158 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
CTSD-209ENST00000637158 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
CTSD-209ENST00000637158 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
CTSD-209ENST00000637158 PMAIP1Q13794 54 aa5.81□□□□□ -1.48
CTSD-209ENST00000637158 BRK1Q8WUW1 75 aa5.79□□□□□ -1.48
CTSD-209ENST00000637158 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
CTSD-209ENST00000637158 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
CTSD-209ENST00000637158 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
CTSD-209ENST00000637158 KRTAP4-11Q9BYQ6 195 aa5.67□□□□□ -1.5
CTSD-209ENST00000637158 K7ERS5 55 aa5.6□□□□□ -1.51
CTSD-209ENST00000637158 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
CTSD-209ENST00000637158 H3BS24 57 aa5.55□□□□□ -1.52
CTSD-209ENST00000637158 AHNAKQ09666 5890 aaKnown RBP5.53□□□□□ -1.52
CTSD-209ENST00000637158 KTN1-AS1Q86SY8 53 aa5.52□□□□□ -1.53
CTSD-209ENST00000637158 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
CTSD-209ENST00000637158 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
CTSD-209ENST00000637158 MUC5BQ9HC84 5762 aaPredicted RBP5.5□□□□□ -1.53
CTSD-209ENST00000637158 MUC5ACP98088 5654 aa5.49□□□□□ -1.53
CTSD-209ENST00000637158 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
CTSD-209ENST00000637158 MT1AP04731 61 aa5.48□□□□□ -1.53
CTSD-209ENST00000637158 KRTAP5-8O75690 187 aa5.46□□□□□ -1.54
CTSD-209ENST00000637158 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
CTSD-209ENST00000637158 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
CTSD-209ENST00000637158 ROMO1P60602 79 aa5.36□□□□□ -1.55
CTSD-209ENST00000637158 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
CTSD-209ENST00000637158 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
CTSD-209ENST00000637158 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
CTSD-209ENST00000637158 A0A0A0MQY5 61 aa5.17□□□□□ -1.58
CTSD-209ENST00000637158 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
CTSD-209ENST00000637158 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
CTSD-209ENST00000637158 MT3P25713 68 aa5.08□□□□□ -1.6
CTSD-209ENST00000637158 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
CTSD-209ENST00000637158 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
CTSD-209ENST00000637158 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
CTSD-209ENST00000637158 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
CTSD-209ENST00000637158 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
CTSD-209ENST00000637158 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
CTSD-209ENST00000637158 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
CTSD-209ENST00000637158 KRTAP4-12Q9BQ66 201 aa4.16□□□□□ -1.74
CTSD-209ENST00000637158 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
CTSD-209ENST00000637158 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
CTSD-209ENST00000637158 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
CTSD-209ENST00000637158 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
CTSD-209ENST00000637158 INE1O15225 51 aa3.84□□□□□ -1.79
CTSD-209ENST00000637158 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
CTSD-209ENST00000637158 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
CTSD-209ENST00000637158 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
CTSD-209ENST00000637158 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
CTSD-209ENST00000637158 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
CTSD-209ENST00000637158 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
CTSD-209ENST00000637158 PRM1P04553 51 aa2.77□□□□□ -1.97
CTSD-209ENST00000637158 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms