RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 LUZP6Q538Z0 58 aa7.6□□□□□ -1.19
CLN8-213ENST00000637156 KRTAP6-3Q3LI67 103 aa7.53□□□□□ -1.2
CLN8-213ENST00000637156 MT1LQ93083 61 aa7.51□□□□□ -1.21
CLN8-213ENST00000637156 MDN1Q9NU22 5596 aa7.44□□□□□ -1.22
CLN8-213ENST00000637156 KRTAP19-3Q7Z4W3 81 aa7.41□□□□□ -1.22
CLN8-213ENST00000637156 KRTAP9-7A8MTY7 169 aa7.37□□□□□ -1.23
CLN8-213ENST00000637156 LCE1AQ5T7P2 110 aa7.34□□□□□ -1.23
CLN8-213ENST00000637156 MT1GP13640 62 aa7.34□□□□□ -1.23
CLN8-213ENST00000637156 LCE3CQ5T5A8 94 aa7.33□□□□□ -1.24
CLN8-213ENST00000637156 LCE5AQ5TCM9 118 aa7.32□□□□□ -1.24
CLN8-213ENST00000637156 KRTAP19-4Q3LI73 84 aa7.32□□□□□ -1.24
CLN8-213ENST00000637156 KRTAP4-7Q9BYR0 210 aa7.32□□□□□ -1.24
CLN8-213ENST00000637156 SPRR2EP22531 72 aa7.26□□□□□ -1.25
CLN8-213ENST00000637156 SPRR2BP35325 72 aa7.26□□□□□ -1.25
CLN8-213ENST00000637156 SPRR2AP35326 72 aa7.26□□□□□ -1.25
CLN8-213ENST00000637156 MT1MQ8N339 61 aa7.24□□□□□ -1.25
CLN8-213ENST00000637156 KRTAP4-3Q9BYR4 195 aa7.15□□□□□ -1.27
CLN8-213ENST00000637156 DSTQ03001 7570 aaKnown RBP7.13□□□□□ -1.27
CLN8-213ENST00000637156 NEBP20929 6669 aa7.07□□□□□ -1.28
CLN8-213ENST00000637156 A0A0A0MQY5 61 aa7□□□□□ -1.29
CLN8-213ENST00000637156 SPRR2DP22532 72 aa7□□□□□ -1.29
CLN8-213ENST00000637156 KRTAP9-6A8MVA2 160 aa6.98□□□□□ -1.29
CLN8-213ENST00000637156 LOC100996750A0A140TA64 210 aa6.87□□□□□ -1.31
CLN8-213ENST00000637156 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
CLN8-213ENST00000637156 KRTAP2-3P0C7H8 128 aa6.6□□□□□ -1.35
CLN8-213ENST00000637156 KRTAP2-4Q9BYR9 128 aa6.6□□□□□ -1.35
CLN8-213ENST00000637156 KRTAP5-5Q701N2 237 aaPredicted RBP6.56□□□□□ -1.36
CLN8-213ENST00000637156 KRTAP20-1Q3LI63 56 aa6.5□□□□□ -1.37
CLN8-213ENST00000637156 INE1O15225 51 aa6.48□□□□□ -1.37
CLN8-213ENST00000637156 KRTAP2-2Q9BYT5 123 aa6.47□□□□□ -1.37
CLN8-213ENST00000637156 KRTAP2-1Q9BYU5 128 aa6.47□□□□□ -1.37
CLN8-213ENST00000637156 MT1AP04731 61 aa6.35□□□□□ -1.39
CLN8-213ENST00000637156 KRTAP6-1Q3LI64 71 aa6.34□□□□□ -1.39
CLN8-213ENST00000637156 KRTAP5-4Q6L8H1 288 aa6.33□□□□□ -1.4
CLN8-213ENST00000637156 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
CLN8-213ENST00000637156 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
CLN8-213ENST00000637156 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
CLN8-213ENST00000637156 MT4P47944 62 aa6.11□□□□□ -1.43
CLN8-213ENST00000637156 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
CLN8-213ENST00000637156 KRTAP9-4Q9BYQ2 154 aa6.09□□□□□ -1.44
CLN8-213ENST00000637156 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.44
CLN8-213ENST00000637156 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
CLN8-213ENST00000637156 HMCN1Q96RW7 5635 aa5.99□□□□□ -1.45
CLN8-213ENST00000637156 KRTAP20-2Q3LI61 65 aa5.92□□□□□ -1.46
CLN8-213ENST00000637156 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
CLN8-213ENST00000637156 MT3P25713 68 aa5.77□□□□□ -1.49
CLN8-213ENST00000637156 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
CLN8-213ENST00000637156 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
CLN8-213ENST00000637156 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.51
CLN8-213ENST00000637156 GPR98Q8WXG9 6306 aa5.54□□□□□ -1.52
CLN8-213ENST00000637156 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
CLN8-213ENST00000637156 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
CLN8-213ENST00000637156 AHNAK2Q8IVF2 5795 aa5.29□□□□□ -1.56
CLN8-213ENST00000637156 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
CLN8-213ENST00000637156 KRTAP5-10Q6L8G5 202 aa5.09□□□□□ -1.6
CLN8-213ENST00000637156 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
CLN8-213ENST00000637156 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
CLN8-213ENST00000637156 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
CLN8-213ENST00000637156 KRTAP5-7Q6L8G8 165 aa4.79□□□□□ -1.64
CLN8-213ENST00000637156 PRM1P04553 51 aa4.78□□□□□ -1.64
CLN8-213ENST00000637156 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
CLN8-213ENST00000637156 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
CLN8-213ENST00000637156 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
CLN8-213ENST00000637156 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
CLN8-213ENST00000637156 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
CLN8-213ENST00000637156 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
CLN8-213ENST00000637156 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
CLN8-213ENST00000637156 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
CLN8-213ENST00000637156 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
CLN8-213ENST00000637156 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
CLN8-213ENST00000637156 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.74
CLN8-213ENST00000637156 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
CLN8-213ENST00000637156 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
CLN8-213ENST00000637156 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
CLN8-213ENST00000637156 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
CLN8-213ENST00000637156 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
CLN8-213ENST00000637156 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 120.2 ms