RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
CACNA1A-235ENST00000637004 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
CACNA1A-235ENST00000637004 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
CACNA1A-235ENST00000637004 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.55
CACNA1A-235ENST00000637004 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.55
CACNA1A-235ENST00000637004 KRTAP19-7Q3SYF9 63 aa5.35□□□□□ -1.55
CACNA1A-235ENST00000637004 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
CACNA1A-235ENST00000637004 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
CACNA1A-235ENST00000637004 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
CACNA1A-235ENST00000637004 MT1LQ93083 61 aa5.24□□□□□ -1.57
CACNA1A-235ENST00000637004 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
CACNA1A-235ENST00000637004 MT1EP04732 61 aa5.18□□□□□ -1.58
CACNA1A-235ENST00000637004 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
CACNA1A-235ENST00000637004 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
CACNA1A-235ENST00000637004 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
CACNA1A-235ENST00000637004 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
CACNA1A-235ENST00000637004 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
CACNA1A-235ENST00000637004 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
CACNA1A-235ENST00000637004 NEBP20929 6669 aa4.94□□□□□ -1.62
CACNA1A-235ENST00000637004 MT1GP13640 62 aa4.91□□□□□ -1.62
CACNA1A-235ENST00000637004 SPRR2EP22531 72 aa4.89□□□□□ -1.63
CACNA1A-235ENST00000637004 SPRR2BP35325 72 aa4.89□□□□□ -1.63
CACNA1A-235ENST00000637004 SPRR2AP35326 72 aa4.89□□□□□ -1.63
CACNA1A-235ENST00000637004 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
CACNA1A-235ENST00000637004 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
CACNA1A-235ENST00000637004 MT1MQ8N339 61 aa4.82□□□□□ -1.64
CACNA1A-235ENST00000637004 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
CACNA1A-235ENST00000637004 SPRR2DP22532 72 aa4.7□□□□□ -1.66
CACNA1A-235ENST00000637004 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
CACNA1A-235ENST00000637004 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
CACNA1A-235ENST00000637004 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
CACNA1A-235ENST00000637004 MT1AP04731 61 aa4.63□□□□□ -1.67
CACNA1A-235ENST00000637004 KRTAP20-1Q3LI63 56 aa4.58□□□□□ -1.68
CACNA1A-235ENST00000637004 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
CACNA1A-235ENST00000637004 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
CACNA1A-235ENST00000637004 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
CACNA1A-235ENST00000637004 PRM1P04553 51 aa4.43□□□□□ -1.7
CACNA1A-235ENST00000637004 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
CACNA1A-235ENST00000637004 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
CACNA1A-235ENST00000637004 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
CACNA1A-235ENST00000637004 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
CACNA1A-235ENST00000637004 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
CACNA1A-235ENST00000637004 MT4P47944 62 aa4.22□□□□□ -1.73
CACNA1A-235ENST00000637004 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
CACNA1A-235ENST00000637004 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
CACNA1A-235ENST00000637004 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.74
CACNA1A-235ENST00000637004 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
CACNA1A-235ENST00000637004 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
CACNA1A-235ENST00000637004 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
CACNA1A-235ENST00000637004 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
CACNA1A-235ENST00000637004 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
CACNA1A-235ENST00000637004 MT3P25713 68 aa3.96□□□□□ -1.78
CACNA1A-235ENST00000637004 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
CACNA1A-235ENST00000637004 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
CACNA1A-235ENST00000637004 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
CACNA1A-235ENST00000637004 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
CACNA1A-235ENST00000637004 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
CACNA1A-235ENST00000637004 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CACNA1A-235ENST00000637004 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
CACNA1A-235ENST00000637004 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
CACNA1A-235ENST00000637004 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
CACNA1A-235ENST00000637004 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
CACNA1A-235ENST00000637004 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
CACNA1A-235ENST00000637004 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
CACNA1A-235ENST00000637004 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
CACNA1A-235ENST00000637004 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
CACNA1A-235ENST00000637004 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
CACNA1A-235ENST00000637004 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
CACNA1A-235ENST00000637004 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
CACNA1A-235ENST00000637004 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
CACNA1A-235ENST00000637004 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.95
CACNA1A-235ENST00000637004 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
CACNA1A-235ENST00000637004 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
CACNA1A-235ENST00000637004 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
CACNA1A-235ENST00000637004 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -2
CACNA1A-235ENST00000637004 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
CACNA1A-235ENST00000637004 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
CACNA1A-235ENST00000637004 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 82.7 ms