RNA–Protein interactions for RNA: ENST00000636721.1

CACNB4-231, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-231	ENST00000636721	MT1X	P80297	61 aa		3.8	□□□□□ -1.8
CACNB4-231	ENST00000636721	LCE3A	Q5TA76	89 aa		3.8	□□□□□ -1.8
CACNB4-231	ENST00000636721	KRTAP10-12	P60413	245 aa		3.75	□□□□□ -1.81
CACNB4-231	ENST00000636721	KRTAP12-3	P60328	96 aa		3.69	□□□□□ -1.82
CACNB4-231	ENST00000636721	SSPO	A2VEC9	5147 aa		3.66	□□□□□ -1.82
CACNB4-231	ENST00000636721	USH2A	O75445	5202 aa		3.65	□□□□□ -1.82
CACNB4-231	ENST00000636721	KRTAP5-11	Q6L8G4	156 aa		3.65	□□□□□ -1.82
CACNB4-231	ENST00000636721		A0A0A0MQY5	61 aa		3.65	□□□□□ -1.83
CACNB4-231	ENST00000636721	KRTAP10-7	P60409	375 aa	Predicted RBP	3.65	□□□□□ -1.83
CACNB4-231	ENST00000636721	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.6	□□□□□ -1.83
CACNB4-231	ENST00000636721	LCE1A	Q5T7P2	110 aa		3.55	□□□□□ -1.84
CACNB4-231	ENST00000636721	KRTAP19-5	Q3LI72	72 aa		3.51	□□□□□ -1.85
CACNB4-231	ENST00000636721	LCE3C	Q5T5A8	94 aa		3.47	□□□□□ -1.85
CACNB4-231	ENST00000636721	MACF1	Q9UPN3	7388 aa	Known RBP	3.46	□□□□□ -1.85
CACNB4-231	ENST00000636721	SYNE2	Q8WXH0	6885 aa	Known RBP	3.45	□□□□□ -1.86
CACNB4-231	ENST00000636721	KRTAP19-6	Q3LI70	58 aa		3.43	□□□□□ -1.86
CACNB4-231	ENST00000636721	KRTAP5-9	P26371	169 aa		3.41	□□□□□ -1.86
CACNB4-231	ENST00000636721	KRTAP19-7	Q3SYF9	63 aa		3.39	□□□□□ -1.87
CACNB4-231	ENST00000636721	INE1	O15225	51 aa		3.36	□□□□□ -1.87
CACNB4-231	ENST00000636721	KRTAP5-1	Q6L8H4	278 aa		3.36	□□□□□ -1.87
CACNB4-231	ENST00000636721	KRTAP2-2	Q9BYT5	123 aa		3.34	□□□□□ -1.87
CACNB4-231	ENST00000636721	KRTAP5-4	Q6L8H1	288 aa		3.34	□□□□□ -1.88
CACNB4-231	ENST00000636721	MT1E	P04732	61 aa		3.33	□□□□□ -1.88
CACNB4-231	ENST00000636721	KRTAP6-3	Q3LI67	103 aa		3.32	□□□□□ -1.88
CACNB4-231	ENST00000636721	MT1L	Q93083	61 aa		3.31	□□□□□ -1.88
CACNB4-231	ENST00000636721	LCE1E	Q5T753	118 aa		3.3	□□□□□ -1.88
CACNB4-231	ENST00000636721	NEB	P20929	6669 aa		3.28	□□□□□ -1.88
CACNB4-231	ENST00000636721	KRTAP4-4	Q9BYR3	166 aa		3.27	□□□□□ -1.89
CACNB4-231	ENST00000636721	MUC12	Q9UKN1	5478 aa		3.27	□□□□□ -1.89
CACNB4-231	ENST00000636721	KRTAP20-1	Q3LI63	56 aa		3.24	□□□□□ -1.89
CACNB4-231	ENST00000636721	KRTAP9-6	A8MVA2	160 aa		3.22	□□□□□ -1.89
CACNB4-231	ENST00000636721	MT3	P25713	68 aa		3.2	□□□□□ -1.9
CACNB4-231	ENST00000636721	MDN1	Q9NU22	5596 aa		3.19	□□□□□ -1.9
CACNB4-231	ENST00000636721	KRTAP2-3	P0C7H8	128 aa		3.19	□□□□□ -1.9
CACNB4-231	ENST00000636721	MT1G	P13640	62 aa		3.19	□□□□□ -1.9
CACNB4-231	ENST00000636721	KRTAP2-4	Q9BYR9	128 aa		3.19	□□□□□ -1.9
CACNB4-231	ENST00000636721	KRTAP2-1	Q9BYU5	128 aa		3.19	□□□□□ -1.9
CACNB4-231	ENST00000636721	KRTAP19-3	Q7Z4W3	81 aa		3.16	□□□□□ -1.9
CACNB4-231	ENST00000636721	KMT2D	O14686	5537 aa		3.16	□□□□□ -1.9
CACNB4-231	ENST00000636721	GPR98	Q8WXG9	6306 aa		3.14	□□□□□ -1.91
CACNB4-231	ENST00000636721	MT1M	Q8N339	61 aa		3.12	□□□□□ -1.91
CACNB4-231	ENST00000636721	SPRR2F	Q96RM1	72 aa		3.03	□□□□□ -1.92
CACNB4-231	ENST00000636721	KRTAP4-3	Q9BYR4	195 aa		2.99	□□□□□ -1.93
CACNB4-231	ENST00000636721	SPRR2E	P22531	72 aa		2.93	□□□□□ -1.94
CACNB4-231	ENST00000636721	SPRR2B	P35325	72 aa		2.93	□□□□□ -1.94
CACNB4-231	ENST00000636721	SPRR2A	P35326	72 aa		2.93	□□□□□ -1.94
CACNB4-231	ENST00000636721	OBSCN	Q5VST9	7968 aa		2.86	□□□□□ -1.95
CACNB4-231	ENST00000636721	MT1A	P04731	61 aa		2.83	□□□□□ -1.96
CACNB4-231	ENST00000636721	SPRR2D	P22532	72 aa		2.83	□□□□□ -1.96
CACNB4-231	ENST00000636721	LCE1F	Q5T754	118 aa		2.83	□□□□□ -1.96
CACNB4-231	ENST00000636721	KRTAP5-2	Q701N4	177 aa		2.83	□□□□□ -1.96
CACNB4-231	ENST00000636721	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.78	□□□□□ -1.97
CACNB4-231	ENST00000636721	KRTAP6-1	Q3LI64	71 aa		2.76	□□□□□ -1.97
CACNB4-231	ENST00000636721	KRTAP12-4	P60329	112 aa		2.75	□□□□□ -1.97
CACNB4-231	ENST00000636721	DST	Q03001	7570 aa	Known RBP	2.71	□□□□□ -1.98
CACNB4-231	ENST00000636721	LCE3D	Q9BYE3	92 aa		2.67	□□□□□ -1.98
CACNB4-231	ENST00000636721	AHNAK2	Q8IVF2	5795 aa		2.66	□□□□□ -1.98
CACNB4-231	ENST00000636721	LCE3E	Q5T5B0	92 aa		2.64	□□□□□ -1.99
CACNB4-231	ENST00000636721	HMCN1	Q96RW7	5635 aa		2.62	□□□□□ -1.99
CACNB4-231	ENST00000636721	SYNE1	Q8NF91	8797 aa	Known RBP	2.57	□□□□□ -2
CACNB4-231	ENST00000636721	KRTAP5-10	Q6L8G5	202 aa		2.52	□□□□□ -2.01
CACNB4-231	ENST00000636721	MT4	P47944	62 aa		2.49	□□□□□ -2.01
CACNB4-231	ENST00000636721	KRTAP6-2	Q3LI66	62 aa		2.49	□□□□□ -2.01
CACNB4-231	ENST00000636721	KRTAP5-7	Q6L8G8	165 aa		2.48	□□□□□ -2.01
CACNB4-231	ENST00000636721	KRTAP5-8	O75690	187 aa		2.47	□□□□□ -2.01
CACNB4-231	ENST00000636721	AHNAK	Q09666	5890 aa	Known RBP	2.42	□□□□□ -2.02
CACNB4-231	ENST00000636721	PRM1	P04553	51 aa		2.4	□□□□□ -2.03
CACNB4-231	ENST00000636721	KRTAP20-2	Q3LI61	65 aa		2.33	□□□□□ -2.04
CACNB4-231	ENST00000636721	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.26	□□□□□ -2.05
CACNB4-231	ENST00000636721	MUC5AC	P98088	5654 aa		2.23	□□□□□ -2.05
CACNB4-231	ENST00000636721	LCE1C	Q5T751	118 aa		2.12	□□□□□ -2.07
CACNB4-231	ENST00000636721	LCE1B	Q5T7P3	118 aa		2.12	□□□□□ -2.07
CACNB4-231	ENST00000636721	KRTAP21-2	Q3LI59	83 aa		1.81	□□□□□ -2.12
CACNB4-231	ENST00000636721	MUC19	Q7Z5P9	8384 aa		1.79	□□□□□ -2.12
CACNB4-231	ENST00000636721	PHGR1	C9JFL3	82 aa		1.56	□□□□□ -2.16
CACNB4-231	ENST00000636721	KRTAP21-1	Q3LI58	79 aa		1.55	□□□□□ -2.16
CACNB4-231	ENST00000636721	MUC16	Q8WXI7	14507 aa		1	□□□□□ -2.25

Retrieved 77 of 20,778 RNA–protein pairs in 128 ms