RNA–Protein interactions for RNA: ENST00000636345.1

NRXN1-248, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-248ENST00000636345 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.98
NRXN1-248ENST00000636345 KRTAP10-5P60370 271 aa2.71□□□□□ -1.98
NRXN1-248ENST00000636345 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
NRXN1-248ENST00000636345 LCE3BQ5TA77 95 aa2.69□□□□□ -1.98
NRXN1-248ENST00000636345 KRTAP9-3Q9BYQ3 159 aa2.68□□□□□ -1.98
NRXN1-248ENST00000636345 KRTAP10-7P60409 375 aaPredicted RBP2.67□□□□□ -1.98
NRXN1-248ENST00000636345 INE1O15225 51 aa2.67□□□□□ -1.98
NRXN1-248ENST00000636345 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
NRXN1-248ENST00000636345 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
NRXN1-248ENST00000636345 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
NRXN1-248ENST00000636345 LCE4AQ5TA78 99 aa2.56□□□□□ -2
NRXN1-248ENST00000636345 KRTAP9-7A8MTY7 169 aa2.54□□□□□ -2
NRXN1-248ENST00000636345 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
NRXN1-248ENST00000636345 MUC12Q9UKN1 5478 aa2.49□□□□□ -2.01
NRXN1-248ENST00000636345 SYNE2Q8WXH0 6885 aaKnown RBP2.47□□□□□ -2.01
NRXN1-248ENST00000636345 LCE5AQ5TCM9 118 aa2.45□□□□□ -2.02
NRXN1-248ENST00000636345 KRTAP19-6Q3LI70 58 aa2.44□□□□□ -2.02
NRXN1-248ENST00000636345 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
NRXN1-248ENST00000636345 KRTAP19-7Q3SYF9 63 aa2.4□□□□□ -2.02
NRXN1-248ENST00000636345 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
NRXN1-248ENST00000636345 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
NRXN1-248ENST00000636345 KRTAP9-6A8MVA2 160 aa2.38□□□□□ -2.03
NRXN1-248ENST00000636345 MT1GP13640 62 aa2.37□□□□□ -2.03
NRXN1-248ENST00000636345 MT1EP04732 61 aa2.36□□□□□ -2.03
NRXN1-248ENST00000636345 MT1LQ93083 61 aa2.36□□□□□ -2.03
NRXN1-248ENST00000636345 KRTAP6-3Q3LI67 103 aa2.31□□□□□ -2.04
NRXN1-248ENST00000636345 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
NRXN1-248ENST00000636345 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.05
NRXN1-248ENST00000636345 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.05
NRXN1-248ENST00000636345 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.05
NRXN1-248ENST00000636345 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
NRXN1-248ENST00000636345 MACF1Q9UPN3 7388 aaKnown RBP2.23□□□□□ -2.05
NRXN1-248ENST00000636345 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
NRXN1-248ENST00000636345 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
NRXN1-248ENST00000636345 MT1MQ8N339 61 aa2.21□□□□□ -2.06
NRXN1-248ENST00000636345 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
NRXN1-248ENST00000636345 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
NRXN1-248ENST00000636345 SPRR2EP22531 72 aa2.12□□□□□ -2.07
NRXN1-248ENST00000636345 SPRR2BP35325 72 aa2.12□□□□□ -2.07
NRXN1-248ENST00000636345 SPRR2AP35326 72 aa2.12□□□□□ -2.07
NRXN1-248ENST00000636345 KRTAP20-1Q3LI63 56 aa2.12□□□□□ -2.07
NRXN1-248ENST00000636345 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
NRXN1-248ENST00000636345 LCE1AQ5T7P2 110 aa2.09□□□□□ -2.08
NRXN1-248ENST00000636345 SPRR2DP22532 72 aa2.06□□□□□ -2.08
NRXN1-248ENST00000636345 NEBP20929 6669 aa2.05□□□□□ -2.08
NRXN1-248ENST00000636345 KRTAP2-2Q9BYT5 123 aa2.02□□□□□ -2.09
NRXN1-248ENST00000636345 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
NRXN1-248ENST00000636345 PRM1P04553 51 aa2□□□□□ -2.09
NRXN1-248ENST00000636345 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
NRXN1-248ENST00000636345 MT1AP04731 61 aa2□□□□□ -2.09
NRXN1-248ENST00000636345 MT3P25713 68 aa1.99□□□□□ -2.09
NRXN1-248ENST00000636345 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
NRXN1-248ENST00000636345 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
NRXN1-248ENST00000636345 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
NRXN1-248ENST00000636345 KRTAP5-4Q6L8H1 288 aa1.92□□□□□ -2.1
NRXN1-248ENST00000636345 LCE1EQ5T753 118 aa1.9□□□□□ -2.1
NRXN1-248ENST00000636345 KRTAP5-5Q701N2 237 aaPredicted RBP1.9□□□□□ -2.11
NRXN1-248ENST00000636345 MT4P47944 62 aa1.88□□□□□ -2.11
NRXN1-248ENST00000636345 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
NRXN1-248ENST00000636345 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
NRXN1-248ENST00000636345 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
NRXN1-248ENST00000636345 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
NRXN1-248ENST00000636345 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
NRXN1-248ENST00000636345 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
NRXN1-248ENST00000636345 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
NRXN1-248ENST00000636345 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
NRXN1-248ENST00000636345 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
NRXN1-248ENST00000636345 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
NRXN1-248ENST00000636345 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
NRXN1-248ENST00000636345 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
NRXN1-248ENST00000636345 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
NRXN1-248ENST00000636345 LCE1CQ5T751 118 aa1.37□□□□□ -2.19
NRXN1-248ENST00000636345 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
NRXN1-248ENST00000636345 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
NRXN1-248ENST00000636345 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
NRXN1-248ENST00000636345 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
NRXN1-248ENST00000636345 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 65.6 ms