RNA–Protein interactions for RNA: ENST00000636168.1

CHRNA1-208, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA1, Length 1,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-208ENST00000636168 SPRR2FQ96RM1 72 aa5.04□□□□□ -1.6
CHRNA1-208ENST00000636168 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
CHRNA1-208ENST00000636168 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
CHRNA1-208ENST00000636168 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
CHRNA1-208ENST00000636168 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
CHRNA1-208ENST00000636168 SPRR2EP22531 72 aa4.93□□□□□ -1.62
CHRNA1-208ENST00000636168 SPRR2BP35325 72 aa4.93□□□□□ -1.62
CHRNA1-208ENST00000636168 SPRR2AP35326 72 aa4.93□□□□□ -1.62
CHRNA1-208ENST00000636168 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
CHRNA1-208ENST00000636168 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
CHRNA1-208ENST00000636168 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
CHRNA1-208ENST00000636168 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
CHRNA1-208ENST00000636168 SPRR2DP22532 72 aa4.76□□□□□ -1.65
CHRNA1-208ENST00000636168 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
CHRNA1-208ENST00000636168 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
CHRNA1-208ENST00000636168 MT1EP04732 61 aa4.68□□□□□ -1.66
CHRNA1-208ENST00000636168 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.66
CHRNA1-208ENST00000636168 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.66
CHRNA1-208ENST00000636168 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
CHRNA1-208ENST00000636168 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
CHRNA1-208ENST00000636168 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
CHRNA1-208ENST00000636168 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
CHRNA1-208ENST00000636168 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
CHRNA1-208ENST00000636168 MT1GP13640 62 aa4.52□□□□□ -1.69
CHRNA1-208ENST00000636168 MT1LQ93083 61 aa4.49□□□□□ -1.69
CHRNA1-208ENST00000636168 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
CHRNA1-208ENST00000636168 MT1MQ8N339 61 aa4.45□□□□□ -1.7
CHRNA1-208ENST00000636168 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
CHRNA1-208ENST00000636168 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
CHRNA1-208ENST00000636168 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
CHRNA1-208ENST00000636168 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
CHRNA1-208ENST00000636168 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
CHRNA1-208ENST00000636168 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
CHRNA1-208ENST00000636168 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
CHRNA1-208ENST00000636168 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
CHRNA1-208ENST00000636168 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
CHRNA1-208ENST00000636168 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
CHRNA1-208ENST00000636168 MT4P47944 62 aa4.16□□□□□ -1.74
CHRNA1-208ENST00000636168 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.74
CHRNA1-208ENST00000636168 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
CHRNA1-208ENST00000636168 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
CHRNA1-208ENST00000636168 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
CHRNA1-208ENST00000636168 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.77
CHRNA1-208ENST00000636168 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
CHRNA1-208ENST00000636168 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
CHRNA1-208ENST00000636168 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
CHRNA1-208ENST00000636168 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
CHRNA1-208ENST00000636168 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
CHRNA1-208ENST00000636168 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
CHRNA1-208ENST00000636168 MT1AP04731 61 aa3.82□□□□□ -1.8
CHRNA1-208ENST00000636168 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
CHRNA1-208ENST00000636168 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CHRNA1-208ENST00000636168 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
CHRNA1-208ENST00000636168 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
CHRNA1-208ENST00000636168 LCE1EQ5T753 118 aa3.65□□□□□ -1.82
CHRNA1-208ENST00000636168 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
CHRNA1-208ENST00000636168 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
CHRNA1-208ENST00000636168 MT3P25713 68 aa3.55□□□□□ -1.84
CHRNA1-208ENST00000636168 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
CHRNA1-208ENST00000636168 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
CHRNA1-208ENST00000636168 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
CHRNA1-208ENST00000636168 PRM1P04553 51 aa3.47□□□□□ -1.85
CHRNA1-208ENST00000636168 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
CHRNA1-208ENST00000636168 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
CHRNA1-208ENST00000636168 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
CHRNA1-208ENST00000636168 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
CHRNA1-208ENST00000636168 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
CHRNA1-208ENST00000636168 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
CHRNA1-208ENST00000636168 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
CHRNA1-208ENST00000636168 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
CHRNA1-208ENST00000636168 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
CHRNA1-208ENST00000636168 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
CHRNA1-208ENST00000636168 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
CHRNA1-208ENST00000636168 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
CHRNA1-208ENST00000636168 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
CHRNA1-208ENST00000636168 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
CHRNA1-208ENST00000636168 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 49.2 ms