RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 LCE4AQ5TA78 99 aa5.92□□□□□ -1.46
SNRNP48-203ENST00000634363 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
SNRNP48-203ENST00000634363 DSTQ03001 7570 aaKnown RBP5.88□□□□□ -1.47
SNRNP48-203ENST00000634363 RPS28P62857 69 aaKnown RBP5.87□□□□□ -1.47
SNRNP48-203ENST00000634363 LCE5AQ5TCM9 118 aa5.84□□□□□ -1.47
SNRNP48-203ENST00000634363 K7ERS5 55 aa5.83□□□□□ -1.48
SNRNP48-203ENST00000634363 TNP1P09430 55 aa5.83□□□□□ -1.48
SNRNP48-203ENST00000634363 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
SNRNP48-203ENST00000634363 KRTAP4-2Q9BYR5 136 aa5.82□□□□□ -1.48
SNRNP48-203ENST00000634363 A6NED7 52 aa5.8□□□□□ -1.48
SNRNP48-203ENST00000634363 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
SNRNP48-203ENST00000634363 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
SNRNP48-203ENST00000634363 GPR98Q8WXG9 6306 aa5.78□□□□□ -1.48
SNRNP48-203ENST00000634363 MT1EP04732 61 aa5.76□□□□□ -1.49
SNRNP48-203ENST00000634363 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
SNRNP48-203ENST00000634363 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
SNRNP48-203ENST00000634363 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
SNRNP48-203ENST00000634363 MT4P47944 62 aa5.66□□□□□ -1.5
SNRNP48-203ENST00000634363 MT1GP13640 62 aa5.62□□□□□ -1.51
SNRNP48-203ENST00000634363 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
SNRNP48-203ENST00000634363 PP632Q6XCG6 107 aa5.59□□□□□ -1.51
SNRNP48-203ENST00000634363 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
SNRNP48-203ENST00000634363 MT1MQ8N339 61 aa5.51□□□□□ -1.53
SNRNP48-203ENST00000634363 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
SNRNP48-203ENST00000634363 MT1LQ93083 61 aa5.47□□□□□ -1.53
SNRNP48-203ENST00000634363 KRTAP5-10Q6L8G5 202 aa5.45□□□□□ -1.54
SNRNP48-203ENST00000634363 KRTAP4-3Q9BYR4 195 aa5.45□□□□□ -1.54
SNRNP48-203ENST00000634363 HMCN1Q96RW7 5635 aa5.44□□□□□ -1.54
SNRNP48-203ENST00000634363 ROMO1P60602 79 aa5.43□□□□□ -1.54
SNRNP48-203ENST00000634363 KRTAP5-4Q6L8H1 288 aa5.41□□□□□ -1.54
SNRNP48-203ENST00000634363 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
SNRNP48-203ENST00000634363 AHNAK2Q8IVF2 5795 aa5.32□□□□□ -1.56
SNRNP48-203ENST00000634363 KRTAP5-7Q6L8G8 165 aa5.27□□□□□ -1.57
SNRNP48-203ENST00000634363 KRTAP5-3Q6L8H2 238 aa5.27□□□□□ -1.57
SNRNP48-203ENST00000634363 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
SNRNP48-203ENST00000634363 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
SNRNP48-203ENST00000634363 KRTAP20-2Q3LI61 65 aa5.16□□□□□ -1.58
SNRNP48-203ENST00000634363 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
SNRNP48-203ENST00000634363 SVIPQ8NHG7 77 aa5.13□□□□□ -1.59
SNRNP48-203ENST00000634363 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
SNRNP48-203ENST00000634363 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
SNRNP48-203ENST00000634363 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
SNRNP48-203ENST00000634363 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
SNRNP48-203ENST00000634363 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
SNRNP48-203ENST00000634363 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
SNRNP48-203ENST00000634363 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
SNRNP48-203ENST00000634363 MT1AP04731 61 aa4.67□□□□□ -1.66
SNRNP48-203ENST00000634363 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
SNRNP48-203ENST00000634363 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
SNRNP48-203ENST00000634363 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.67
SNRNP48-203ENST00000634363 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
SNRNP48-203ENST00000634363 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
SNRNP48-203ENST00000634363 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
SNRNP48-203ENST00000634363 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
SNRNP48-203ENST00000634363 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
SNRNP48-203ENST00000634363 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
SNRNP48-203ENST00000634363 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
SNRNP48-203ENST00000634363 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
SNRNP48-203ENST00000634363 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
SNRNP48-203ENST00000634363 MT3P25713 68 aa4.27□□□□□ -1.73
SNRNP48-203ENST00000634363 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
SNRNP48-203ENST00000634363 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
SNRNP48-203ENST00000634363 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
SNRNP48-203ENST00000634363 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
SNRNP48-203ENST00000634363 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
SNRNP48-203ENST00000634363 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
SNRNP48-203ENST00000634363 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
SNRNP48-203ENST00000634363 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
SNRNP48-203ENST00000634363 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
SNRNP48-203ENST00000634363 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
SNRNP48-203ENST00000634363 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
SNRNP48-203ENST00000634363 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
SNRNP48-203ENST00000634363 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
SNRNP48-203ENST00000634363 PRM1P04553 51 aa2.79□□□□□ -1.96
SNRNP48-203ENST00000634363 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SNRNP48-203ENST00000634363 INE1O15225 51 aa2.76□□□□□ -1.97
SNRNP48-203ENST00000634363 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
SNRNP48-203ENST00000634363 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 120.9 ms