RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	MT4	P47944	62 aa		7.94	□□□□□ -1.14
SRRM2-231	ENST00000630499	PCP4	P48539	62 aa		7.94	□□□□□ -1.14
SRRM2-231	ENST00000630499	PP632	Q6XCG6	107 aa		7.93	□□□□□ -1.14
SRRM2-231	ENST00000630499	MT1L	Q93083	61 aa		7.9	□□□□□ -1.14
SRRM2-231	ENST00000630499		Q1T7F1	81 aa		7.89	□□□□□ -1.15
SRRM2-231	ENST00000630499		H3BS24	57 aa		7.88	□□□□□ -1.15
SRRM2-231	ENST00000630499	KRTAP5-4	Q6L8H1	288 aa		7.88	□□□□□ -1.15
SRRM2-231	ENST00000630499	KRTAP5-10	Q6L8G5	202 aa		7.81	□□□□□ -1.16
SRRM2-231	ENST00000630499	KRTAP4-3	Q9BYR4	195 aa		7.8	□□□□□ -1.16
SRRM2-231	ENST00000630499	PSPHP1	O15172	72 aa		7.79	□□□□□ -1.16
SRRM2-231	ENST00000630499	MIR22HG	Q0VDD5	57 aa		7.79	□□□□□ -1.16
SRRM2-231	ENST00000630499	RPS28	P62857	69 aa	Known RBP	7.78	□□□□□ -1.16
SRRM2-231	ENST00000630499	KRTAP4-6	Q9BYQ5	205 aa		7.75	□□□□□ -1.17
SRRM2-231	ENST00000630499	C10orf95	Q9H7T3	257 aa		7.7	□□□□□ -1.18
SRRM2-231	ENST00000630499	LCE3A	Q5TA76	89 aa		7.67	□□□□□ -1.18
SRRM2-231	ENST00000630499	TNP1	P09430	55 aa		7.66	□□□□□ -1.18
SRRM2-231	ENST00000630499		K7ERS5	55 aa		7.63	□□□□□ -1.19
SRRM2-231	ENST00000630499	SVIP	Q8NHG7	77 aa		7.6	□□□□□ -1.19
SRRM2-231	ENST00000630499		A6NED7	52 aa		7.57	□□□□□ -1.2
SRRM2-231	ENST00000630499	KRTAP5-7	Q6L8G8	165 aa		7.54	□□□□□ -1.2
SRRM2-231	ENST00000630499	KRTAP4-7	Q9BYR0	210 aa		7.51	□□□□□ -1.21
SRRM2-231	ENST00000630499	KRTAP5-3	Q6L8H2	238 aa		7.5	□□□□□ -1.21
SRRM2-231	ENST00000630499	LOC100996750	A0A140TA64	210 aa		7.41	□□□□□ -1.22
SRRM2-231	ENST00000630499	KRTAP20-2	Q3LI61	65 aa		7.41	□□□□□ -1.22
SRRM2-231	ENST00000630499	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.41	□□□□□ -1.22
SRRM2-231	ENST00000630499	KRTAP25-1	Q3LHN0	102 aa		7.39	□□□□□ -1.23
SRRM2-231	ENST00000630499	KRTAP12-3	P60328	96 aa		7.35	□□□□□ -1.23
SRRM2-231	ENST00000630499	SPRR5	A0A1B0GTR4	108 aa		7.33	□□□□□ -1.24
SRRM2-231	ENST00000630499	CDC42SE1	Q9NRR8	79 aa		7.3	□□□□□ -1.24
SRRM2-231	ENST00000630499	SYNE1	Q8NF91	8797 aa	Known RBP	7.2	□□□□□ -1.26
SRRM2-231	ENST00000630499	KRTAP23-1	A1A580	65 aa		7.17	□□□□□ -1.26
SRRM2-231	ENST00000630499	KRTAP12-4	P60329	112 aa		7.16	□□□□□ -1.26
SRRM2-231	ENST00000630499	ROMO1	P60602	79 aa		7.13	□□□□□ -1.27
SRRM2-231	ENST00000630499	KRTAP19-4	Q3LI73	84 aa		6.91	□□□□□ -1.3
SRRM2-231	ENST00000630499	KRTAP15-1	Q3LI76	137 aa		6.85	□□□□□ -1.31
SRRM2-231	ENST00000630499	KRTAP5-2	Q701N4	177 aa		6.85	□□□□□ -1.31
SRRM2-231	ENST00000630499	KRTAP4-11	Q9BYQ6	195 aa		6.85	□□□□□ -1.31
SRRM2-231	ENST00000630499	BRK1	Q8WUW1	75 aa		6.83	□□□□□ -1.32
SRRM2-231	ENST00000630499	KRTAP4-12	Q9BQ66	201 aa		6.76	□□□□□ -1.33
SRRM2-231	ENST00000630499	LCE3C	Q5T5A8	94 aa		6.74	□□□□□ -1.33
SRRM2-231	ENST00000630499	KRTAP6-1	Q3LI64	71 aa		6.71	□□□□□ -1.34
SRRM2-231	ENST00000630499	MT1A	P04731	61 aa		6.7	□□□□□ -1.34
SRRM2-231	ENST00000630499	KRTAP5-8	O75690	187 aa		6.67	□□□□□ -1.34
SRRM2-231	ENST00000630499	MUC5AC	P98088	5654 aa		6.63	□□□□□ -1.35
SRRM2-231	ENST00000630499	AHNAK	Q09666	5890 aa	Known RBP	6.63	□□□□□ -1.35
SRRM2-231	ENST00000630499	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.63	□□□□□ -1.35
SRRM2-231	ENST00000630499	KRTAP9-4	Q9BYQ2	154 aa		6.52	□□□□□ -1.37
SRRM2-231	ENST00000630499	KRTAP9-6	A8MVA2	160 aa		6.47	□□□□□ -1.37
SRRM2-231	ENST00000630499	PMAIP1	Q13794	54 aa		6.46	□□□□□ -1.38
SRRM2-231	ENST00000630499	KRTAP6-2	Q3LI66	62 aa		6.46	□□□□□ -1.38
SRRM2-231	ENST00000630499	OBSCN	Q5VST9	7968 aa		6.46	□□□□□ -1.38
SRRM2-231	ENST00000630499	KRTAP9-9	Q9BYP9	154 aa		6.44	□□□□□ -1.38
SRRM2-231	ENST00000630499	PRO0628	Q9UI54	55 aa		6.24	□□□□□ -1.41
SRRM2-231	ENST00000630499		A0A0A0MQY5	61 aa		6.23	□□□□□ -1.41
SRRM2-231	ENST00000630499	KRTAP5-1	Q6L8H4	278 aa		6.2	□□□□□ -1.42
SRRM2-231	ENST00000630499	MT3	P25713	68 aa		6.11	□□□□□ -1.43
SRRM2-231	ENST00000630499	PRAC1	Q96KF2	57 aa		6.1	□□□□□ -1.43
SRRM2-231	ENST00000630499	KTN1-AS1	Q86SY8	53 aa		5.9	□□□□□ -1.46
SRRM2-231	ENST00000630499	KRTAP4-2	Q9BYR5	136 aa		5.78	□□□□□ -1.48
SRRM2-231	ENST00000630499	LCE1E	Q5T753	118 aa		5.76	□□□□□ -1.49
SRRM2-231	ENST00000630499	LCE1B	Q5T7P3	118 aa		5.37	□□□□□ -1.55
SRRM2-231	ENST00000630499	LCE1C	Q5T751	118 aa		5.35	□□□□□ -1.55
SRRM2-231	ENST00000630499	LUZP6	Q538Z0	58 aa		5.19	□□□□□ -1.58
SRRM2-231	ENST00000630499	KRTAP5-11	Q6L8G4	156 aa		4.9	□□□□□ -1.63
SRRM2-231	ENST00000630499	LCE3D	Q9BYE3	92 aa		4.88	□□□□□ -1.63
SRRM2-231	ENST00000630499	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.87	□□□□□ -1.63
SRRM2-231	ENST00000630499	NDUFAF8	A1L188	74 aa		4.84	□□□□□ -1.63
SRRM2-231	ENST00000630499	LCE1F	Q5T754	118 aa		4.83	□□□□□ -1.64
SRRM2-231	ENST00000630499	LCE3E	Q5T5B0	92 aa		4.65	□□□□□ -1.67
SRRM2-231	ENST00000630499	PHGR1	C9JFL3	82 aa		4.49	□□□□□ -1.69
SRRM2-231	ENST00000630499	KRTAP21-2	Q3LI59	83 aa		4.47	□□□□□ -1.69
SRRM2-231	ENST00000630499	KRTAP4-4	Q9BYR3	166 aa		4.08	□□□□□ -1.76
SRRM2-231	ENST00000630499	MUC19	Q7Z5P9	8384 aa		4.02	□□□□□ -1.77
SRRM2-231	ENST00000630499	PRM1	P04553	51 aa		3.65	□□□□□ -1.83
SRRM2-231	ENST00000630499	INE1	O15225	51 aa		3.64	□□□□□ -1.83
SRRM2-231	ENST00000630499	KRTAP21-1	Q3LI58	79 aa		3.41	□□□□□ -1.86
SRRM2-231	ENST00000630499	MUC16	Q8WXI7	14507 aa		2.84	□□□□□ -1.95

Retrieved 77 of 20,778 RNA–protein pairs in 91.6 ms