RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	RPS28	P62857	69 aa	Known RBP	4.76	□□□□□ -1.65
SOX2-OT-256	ENST00000630482	SPATA8	Q6RVD6	105 aa		4.74	□□□□□ -1.65
SOX2-OT-256	ENST00000630482		A0A0D9SG42	100 aa		4.73	□□□□□ -1.65
SOX2-OT-256	ENST00000630482	UQCR11	O14957	56 aa		4.71	□□□□□ -1.66
SOX2-OT-256	ENST00000630482		Q1T7F1	81 aa		4.71	□□□□□ -1.66
SOX2-OT-256	ENST00000630482	KRTAP13-4	Q3LI77	160 aa		4.71	□□□□□ -1.66
SOX2-OT-256	ENST00000630482	PSPHP1	O15172	72 aa		4.68	□□□□□ -1.66
SOX2-OT-256	ENST00000630482	SPINT4	Q6UDR6	99 aa		4.68	□□□□□ -1.66
SOX2-OT-256	ENST00000630482	CAMK2N1	Q7Z7J9	78 aa		4.67	□□□□□ -1.66
SOX2-OT-256	ENST00000630482	NDUFAF8	A1L188	74 aa		4.61	□□□□□ -1.67
SOX2-OT-256	ENST00000630482	MIR22HG	Q0VDD5	57 aa		4.61	□□□□□ -1.67
SOX2-OT-256	ENST00000630482		A8MU10	97 aa		4.6	□□□□□ -1.67
SOX2-OT-256	ENST00000630482		A6NED7	52 aa		4.58	□□□□□ -1.68
SOX2-OT-256	ENST00000630482		K7ERS5	55 aa		4.58	□□□□□ -1.68
SOX2-OT-256	ENST00000630482	DST	Q03001	7570 aa	Known RBP	4.58	□□□□□ -1.68
SOX2-OT-256	ENST00000630482	KRTAP19-7	Q3SYF9	63 aa		4.57	□□□□□ -1.68
SOX2-OT-256	ENST00000630482	KRTAP12-1	P59990	96 aa		4.56	□□□□□ -1.68
SOX2-OT-256	ENST00000630482	MT1E	P04732	61 aa		4.53	□□□□□ -1.68
SOX2-OT-256	ENST00000630482	KRTAP19-3	Q7Z4W3	81 aa		4.52	□□□□□ -1.69
SOX2-OT-256	ENST00000630482	GPR98	Q8WXG9	6306 aa		4.49	□□□□□ -1.69
SOX2-OT-256	ENST00000630482	KRTAP19-5	Q3LI72	72 aa		4.4	□□□□□ -1.71
SOX2-OT-256	ENST00000630482	CDC42SE1	Q9NRR8	79 aa		4.39	□□□□□ -1.71
SOX2-OT-256	ENST00000630482	TNP1	P09430	55 aa		4.37	□□□□□ -1.71
SOX2-OT-256	ENST00000630482	MT4	P47944	62 aa		4.36	□□□□□ -1.71
SOX2-OT-256	ENST00000630482	MT1G	P13640	62 aa		4.35	□□□□□ -1.71
SOX2-OT-256	ENST00000630482	MT1M	Q8N339	61 aa		4.33	□□□□□ -1.72
SOX2-OT-256	ENST00000630482	C10orf95	Q9H7T3	257 aa		4.32	□□□□□ -1.72
SOX2-OT-256	ENST00000630482	PP632	Q6XCG6	107 aa		4.3	□□□□□ -1.72
SOX2-OT-256	ENST00000630482	KRTAP4-3	Q9BYR4	195 aa		4.3	□□□□□ -1.72
SOX2-OT-256	ENST00000630482	MT1L	Q93083	61 aa		4.29	□□□□□ -1.72
SOX2-OT-256	ENST00000630482	HMCN1	Q96RW7	5635 aa		4.29	□□□□□ -1.72
SOX2-OT-256	ENST00000630482	BRK1	Q8WUW1	75 aa		4.27	□□□□□ -1.73
SOX2-OT-256	ENST00000630482	AHNAK2	Q8IVF2	5795 aa		4.25	□□□□□ -1.73
SOX2-OT-256	ENST00000630482	MT3	P25713	68 aa		4.25	□□□□□ -1.73
SOX2-OT-256	ENST00000630482	KRTAP25-1	Q3LHN0	102 aa		4.24	□□□□□ -1.73
SOX2-OT-256	ENST00000630482	PRO0628	Q9UI54	55 aa		4.23	□□□□□ -1.73
SOX2-OT-256	ENST00000630482	ROMO1	P60602	79 aa		4.22	□□□□□ -1.73
SOX2-OT-256	ENST00000630482	KRTAP5-4	Q6L8H1	288 aa		4.22	□□□□□ -1.73
SOX2-OT-256	ENST00000630482	LCE3A	Q5TA76	89 aa		4.21	□□□□□ -1.74
SOX2-OT-256	ENST00000630482	KRTAP5-10	Q6L8G5	202 aa		4.2	□□□□□ -1.74
SOX2-OT-256	ENST00000630482	PMAIP1	Q13794	54 aa		4.06	□□□□□ -1.76
SOX2-OT-256	ENST00000630482	KRTAP5-7	Q6L8G8	165 aa		4.04	□□□□□ -1.76
SOX2-OT-256	ENST00000630482	KRTAP12-3	P60328	96 aa		4.02	□□□□□ -1.77
SOX2-OT-256	ENST00000630482	KRTAP20-2	Q3LI61	65 aa		4.02	□□□□□ -1.77
SOX2-OT-256	ENST00000630482	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.99	□□□□□ -1.77
SOX2-OT-256	ENST00000630482	LUZP6	Q538Z0	58 aa		3.98	□□□□□ -1.77
SOX2-OT-256	ENST00000630482	LCE1F	Q5T754	118 aa		3.93	□□□□□ -1.78
SOX2-OT-256	ENST00000630482	SPRR5	A0A1B0GTR4	108 aa		3.92	□□□□□ -1.78
SOX2-OT-256	ENST00000630482	SYNE1	Q8NF91	8797 aa	Known RBP	3.88	□□□□□ -1.79
SOX2-OT-256	ENST00000630482	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.88	□□□□□ -1.79
SOX2-OT-256	ENST00000630482	KRTAP12-4	P60329	112 aa		3.87	□□□□□ -1.79
SOX2-OT-256	ENST00000630482	KTN1-AS1	Q86SY8	53 aa		3.73	□□□□□ -1.81
SOX2-OT-256	ENST00000630482	LCE3C	Q5T5A8	94 aa		3.72	□□□□□ -1.81
SOX2-OT-256	ENST00000630482	KRTAP5-2	Q701N4	177 aa		3.68	□□□□□ -1.82
SOX2-OT-256	ENST00000630482	KRTAP6-1	Q3LI64	71 aa		3.67	□□□□□ -1.82
SOX2-OT-256	ENST00000630482	MT1A	P04731	61 aa		3.64	□□□□□ -1.83
SOX2-OT-256	ENST00000630482	KRTAP5-8	O75690	187 aa		3.6	□□□□□ -1.83
SOX2-OT-256	ENST00000630482	KRTAP9-6	A8MVA2	160 aa		3.53	□□□□□ -1.84
SOX2-OT-256	ENST00000630482	KRTAP6-2	Q3LI66	62 aa		3.52	□□□□□ -1.85
SOX2-OT-256	ENST00000630482	OBSCN	Q5VST9	7968 aa		3.49	□□□□□ -1.85
SOX2-OT-256	ENST00000630482	KRTAP5-11	Q6L8G4	156 aa		3.49	□□□□□ -1.85
SOX2-OT-256	ENST00000630482	MUC5AC	P98088	5654 aa		3.49	□□□□□ -1.85
SOX2-OT-256	ENST00000630482	AHNAK	Q09666	5890 aa	Known RBP	3.45	□□□□□ -1.86
SOX2-OT-256	ENST00000630482	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.45	□□□□□ -1.86
SOX2-OT-256	ENST00000630482	KRTAP5-1	Q6L8H4	278 aa		3.33	□□□□□ -1.88
SOX2-OT-256	ENST00000630482	LCE3E	Q5T5B0	92 aa		3.28	□□□□□ -1.88
SOX2-OT-256	ENST00000630482	KRTAP4-4	Q9BYR3	166 aa		3.27	□□□□□ -1.89
SOX2-OT-256	ENST00000630482	LCE1E	Q5T753	118 aa		3.13	□□□□□ -1.91
SOX2-OT-256	ENST00000630482	LCE1B	Q5T7P3	118 aa		2.97	□□□□□ -1.93
SOX2-OT-256	ENST00000630482	LCE3D	Q9BYE3	92 aa		2.87	□□□□□ -1.95
SOX2-OT-256	ENST00000630482	LCE1C	Q5T751	118 aa		2.85	□□□□□ -1.95
SOX2-OT-256	ENST00000630482	INE1	O15225	51 aa		2.63	□□□□□ -1.99
SOX2-OT-256	ENST00000630482	PHGR1	C9JFL3	82 aa		2.46	□□□□□ -2.02
SOX2-OT-256	ENST00000630482	KRTAP21-2	Q3LI59	83 aa		2.41	□□□□□ -2.02
SOX2-OT-256	ENST00000630482	MUC19	Q7Z5P9	8384 aa		2.17	□□□□□ -2.06
SOX2-OT-256	ENST00000630482	PRM1	P04553	51 aa		2.15	□□□□□ -2.07
SOX2-OT-256	ENST00000630482	KRTAP21-1	Q3LI58	79 aa		1.82	□□□□□ -2.12
SOX2-OT-256	ENST00000630482	MUC16	Q8WXI7	14507 aa		1.54	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms