RNA–Protein interactions for RNA: ENST00000630295.1

BRCC3-210, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-210ENST00000630295 C10orf95Q9H7T3 257 aa3.57□□□□□ -1.84
BRCC3-210ENST00000630295 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
BRCC3-210ENST00000630295 KRTAP10-12P60413 245 aa3.52□□□□□ -1.85
BRCC3-210ENST00000630295 ROMO1P60602 79 aa3.52□□□□□ -1.85
BRCC3-210ENST00000630295 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
BRCC3-210ENST00000630295 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
BRCC3-210ENST00000630295 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
BRCC3-210ENST00000630295 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
BRCC3-210ENST00000630295 KMT2DO14686 5537 aa3.48□□□□□ -1.85
BRCC3-210ENST00000630295 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
BRCC3-210ENST00000630295 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
BRCC3-210ENST00000630295 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
BRCC3-210ENST00000630295 SPRR2FQ96RM1 72 aa3.42□□□□□ -1.86
BRCC3-210ENST00000630295 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
BRCC3-210ENST00000630295 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
BRCC3-210ENST00000630295 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.87
BRCC3-210ENST00000630295 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
BRCC3-210ENST00000630295 KRTAP5-9P26371 169 aa3.34□□□□□ -1.87
BRCC3-210ENST00000630295 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
BRCC3-210ENST00000630295 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
BRCC3-210ENST00000630295 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
BRCC3-210ENST00000630295 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
BRCC3-210ENST00000630295 SPRR2EP22531 72 aa3.3□□□□□ -1.88
BRCC3-210ENST00000630295 SPRR2BP35325 72 aa3.3□□□□□ -1.88
BRCC3-210ENST00000630295 SPRR2AP35326 72 aa3.3□□□□□ -1.88
BRCC3-210ENST00000630295 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
BRCC3-210ENST00000630295 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
BRCC3-210ENST00000630295 MT1EP04732 61 aa3.27□□□□□ -1.89
BRCC3-210ENST00000630295 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
BRCC3-210ENST00000630295 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
BRCC3-210ENST00000630295 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
BRCC3-210ENST00000630295 NEBP20929 6669 aa3.2□□□□□ -1.9
BRCC3-210ENST00000630295 SPRR2DP22532 72 aa3.19□□□□□ -1.9
BRCC3-210ENST00000630295 MT1LQ93083 61 aa3.18□□□□□ -1.9
BRCC3-210ENST00000630295 MT1GP13640 62 aa3.16□□□□□ -1.9
BRCC3-210ENST00000630295 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
BRCC3-210ENST00000630295 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
BRCC3-210ENST00000630295 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
BRCC3-210ENST00000630295 MT1MQ8N339 61 aa3.1□□□□□ -1.91
BRCC3-210ENST00000630295 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
BRCC3-210ENST00000630295 KRTAP2-3P0C7H8 128 aa3.08□□□□□ -1.92
BRCC3-210ENST00000630295 KRTAP2-4Q9BYR9 128 aa3.08□□□□□ -1.92
BRCC3-210ENST00000630295 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
BRCC3-210ENST00000630295 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
BRCC3-210ENST00000630295 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
BRCC3-210ENST00000630295 DSTQ03001 7570 aaKnown RBP2.96□□□□□ -1.94
BRCC3-210ENST00000630295 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
BRCC3-210ENST00000630295 MT4P47944 62 aa2.78□□□□□ -1.96
BRCC3-210ENST00000630295 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
BRCC3-210ENST00000630295 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
BRCC3-210ENST00000630295 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
BRCC3-210ENST00000630295 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
BRCC3-210ENST00000630295 MT1AP04731 61 aa2.71□□□□□ -1.98
BRCC3-210ENST00000630295 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
BRCC3-210ENST00000630295 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
BRCC3-210ENST00000630295 SYNE1Q8NF91 8797 aaKnown RBP2.66□□□□□ -1.98
BRCC3-210ENST00000630295 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
BRCC3-210ENST00000630295 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
BRCC3-210ENST00000630295 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
BRCC3-210ENST00000630295 INE1O15225 51 aa2.51□□□□□ -2.01
BRCC3-210ENST00000630295 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
BRCC3-210ENST00000630295 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
BRCC3-210ENST00000630295 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
BRCC3-210ENST00000630295 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
BRCC3-210ENST00000630295 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
BRCC3-210ENST00000630295 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
BRCC3-210ENST00000630295 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
BRCC3-210ENST00000630295 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
BRCC3-210ENST00000630295 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
BRCC3-210ENST00000630295 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
BRCC3-210ENST00000630295 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
BRCC3-210ENST00000630295 PRM1P04553 51 aa1.82□□□□□ -2.12
BRCC3-210ENST00000630295 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
BRCC3-210ENST00000630295 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
BRCC3-210ENST00000630295 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
BRCC3-210ENST00000630295 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
BRCC3-210ENST00000630295 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 221.3 ms