RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
CHD2-217ENST00000629136 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
CHD2-217ENST00000629136 SPINT4Q6UDR6 99 aa4.04□□□□□ -1.76
CHD2-217ENST00000629136 MT1EP04732 61 aa4.03□□□□□ -1.76
CHD2-217ENST00000629136 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
CHD2-217ENST00000629136 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
CHD2-217ENST00000629136 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
CHD2-217ENST00000629136 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
CHD2-217ENST00000629136 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
CHD2-217ENST00000629136 A0A1B0GU69 56 aa3.98□□□□□ -1.77
CHD2-217ENST00000629136 A8MU10 97 aa3.95□□□□□ -1.78
CHD2-217ENST00000629136 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
CHD2-217ENST00000629136 KRTAP19-5Q3LI72 72 aa3.94□□□□□ -1.78
CHD2-217ENST00000629136 MT1GP13640 62 aa3.87□□□□□ -1.79
CHD2-217ENST00000629136 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
CHD2-217ENST00000629136 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
CHD2-217ENST00000629136 MT1LQ93083 61 aa3.85□□□□□ -1.79
CHD2-217ENST00000629136 MT1MQ8N339 61 aa3.84□□□□□ -1.79
CHD2-217ENST00000629136 PRR15LQ9BU68 103 aa3.84□□□□□ -1.79
CHD2-217ENST00000629136 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
CHD2-217ENST00000629136 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
CHD2-217ENST00000629136 TNP1P09430 55 aa3.82□□□□□ -1.8
CHD2-217ENST00000629136 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
CHD2-217ENST00000629136 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
CHD2-217ENST00000629136 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
CHD2-217ENST00000629136 UQCR11O14957 56 aa3.73□□□□□ -1.81
CHD2-217ENST00000629136 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
CHD2-217ENST00000629136 MT4P47944 62 aa3.68□□□□□ -1.82
CHD2-217ENST00000629136 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
CHD2-217ENST00000629136 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
CHD2-217ENST00000629136 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
CHD2-217ENST00000629136 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.82
CHD2-217ENST00000629136 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
CHD2-217ENST00000629136 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
CHD2-217ENST00000629136 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
CHD2-217ENST00000629136 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
CHD2-217ENST00000629136 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
CHD2-217ENST00000629136 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
CHD2-217ENST00000629136 LOC100996750A0A140TA64 210 aa3.47□□□□□ -1.85
CHD2-217ENST00000629136 INE1O15225 51 aa3.47□□□□□ -1.85
CHD2-217ENST00000629136 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
CHD2-217ENST00000629136 MT3P25713 68 aa3.44□□□□□ -1.86
CHD2-217ENST00000629136 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
CHD2-217ENST00000629136 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
CHD2-217ENST00000629136 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
CHD2-217ENST00000629136 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
CHD2-217ENST00000629136 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
CHD2-217ENST00000629136 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.87
CHD2-217ENST00000629136 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
CHD2-217ENST00000629136 MT1AP04731 61 aa3.26□□□□□ -1.89
CHD2-217ENST00000629136 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
CHD2-217ENST00000629136 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
CHD2-217ENST00000629136 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
CHD2-217ENST00000629136 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
CHD2-217ENST00000629136 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
CHD2-217ENST00000629136 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CHD2-217ENST00000629136 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
CHD2-217ENST00000629136 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
CHD2-217ENST00000629136 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
CHD2-217ENST00000629136 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
CHD2-217ENST00000629136 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
CHD2-217ENST00000629136 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
CHD2-217ENST00000629136 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
CHD2-217ENST00000629136 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
CHD2-217ENST00000629136 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
CHD2-217ENST00000629136 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
CHD2-217ENST00000629136 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
CHD2-217ENST00000629136 LCE1CQ5T751 118 aa2.54□□□□□ -2
CHD2-217ENST00000629136 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
CHD2-217ENST00000629136 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
CHD2-217ENST00000629136 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
CHD2-217ENST00000629136 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
CHD2-217ENST00000629136 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
CHD2-217ENST00000629136 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
CHD2-217ENST00000629136 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
CHD2-217ENST00000629136 PRM1P04553 51 aa1.72□□□□□ -2.13
CHD2-217ENST00000629136 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CHD2-217ENST00000629136 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 24.4 ms