RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 SPRR2EP22531 72 aa3.03□□□□□ -1.92
NR1I3-235ENST00000628566 SPRR2BP35325 72 aa3.03□□□□□ -1.92
NR1I3-235ENST00000628566 SPRR2AP35326 72 aa3.03□□□□□ -1.92
NR1I3-235ENST00000628566 TNP1P09430 55 aa3.02□□□□□ -1.93
NR1I3-235ENST00000628566 A6NED7 52 aa3□□□□□ -1.93
NR1I3-235ENST00000628566 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
NR1I3-235ENST00000628566 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
NR1I3-235ENST00000628566 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
NR1I3-235ENST00000628566 C10orf95Q9H7T3 257 aa2.95□□□□□ -1.94
NR1I3-235ENST00000628566 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
NR1I3-235ENST00000628566 SPRR2DP22532 72 aa2.92□□□□□ -1.94
NR1I3-235ENST00000628566 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
NR1I3-235ENST00000628566 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
NR1I3-235ENST00000628566 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
NR1I3-235ENST00000628566 MT1EP04732 61 aa2.88□□□□□ -1.95
NR1I3-235ENST00000628566 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
NR1I3-235ENST00000628566 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
NR1I3-235ENST00000628566 CDC42SE1Q9NRR8 79 aa2.88□□□□□ -1.95
NR1I3-235ENST00000628566 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
NR1I3-235ENST00000628566 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
NR1I3-235ENST00000628566 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.95
NR1I3-235ENST00000628566 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
NR1I3-235ENST00000628566 MT1GP13640 62 aa2.82□□□□□ -1.96
NR1I3-235ENST00000628566 ROMO1P60602 79 aa2.81□□□□□ -1.96
NR1I3-235ENST00000628566 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
NR1I3-235ENST00000628566 MT1LQ93083 61 aa2.77□□□□□ -1.97
NR1I3-235ENST00000628566 MT1MQ8N339 61 aa2.73□□□□□ -1.97
NR1I3-235ENST00000628566 BRK1Q8WUW1 75 aa2.71□□□□□ -1.98
NR1I3-235ENST00000628566 PRO0628Q9UI54 55 aa2.68□□□□□ -1.98
NR1I3-235ENST00000628566 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
NR1I3-235ENST00000628566 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
NR1I3-235ENST00000628566 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
NR1I3-235ENST00000628566 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
NR1I3-235ENST00000628566 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
NR1I3-235ENST00000628566 PMAIP1Q13794 54 aa2.57□□□□□ -2
NR1I3-235ENST00000628566 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
NR1I3-235ENST00000628566 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
NR1I3-235ENST00000628566 MT4P47944 62 aa2.53□□□□□ -2
NR1I3-235ENST00000628566 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
NR1I3-235ENST00000628566 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
NR1I3-235ENST00000628566 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
NR1I3-235ENST00000628566 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
NR1I3-235ENST00000628566 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
NR1I3-235ENST00000628566 MT3P25713 68 aa2.44□□□□□ -2.02
NR1I3-235ENST00000628566 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
NR1I3-235ENST00000628566 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
NR1I3-235ENST00000628566 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
NR1I3-235ENST00000628566 MT1AP04731 61 aa2.38□□□□□ -2.03
NR1I3-235ENST00000628566 PRAC1Q96KF2 57 aa2.38□□□□□ -2.03
NR1I3-235ENST00000628566 KRTAP9-6A8MVA2 160 aa2.35□□□□□ -2.03
NR1I3-235ENST00000628566 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
NR1I3-235ENST00000628566 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
NR1I3-235ENST00000628566 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
NR1I3-235ENST00000628566 A0A0A0MQY5 61 aa2.31□□□□□ -2.04
NR1I3-235ENST00000628566 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
NR1I3-235ENST00000628566 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
NR1I3-235ENST00000628566 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
NR1I3-235ENST00000628566 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
NR1I3-235ENST00000628566 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
NR1I3-235ENST00000628566 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
NR1I3-235ENST00000628566 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
NR1I3-235ENST00000628566 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
NR1I3-235ENST00000628566 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
NR1I3-235ENST00000628566 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
NR1I3-235ENST00000628566 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
NR1I3-235ENST00000628566 NDUFAF8A1L188 74 aa1.93□□□□□ -2.1
NR1I3-235ENST00000628566 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
NR1I3-235ENST00000628566 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
NR1I3-235ENST00000628566 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
NR1I3-235ENST00000628566 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
NR1I3-235ENST00000628566 INE1O15225 51 aa1.6□□□□□ -2.15
NR1I3-235ENST00000628566 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
NR1I3-235ENST00000628566 PRM1P04553 51 aa1.42□□□□□ -2.18
NR1I3-235ENST00000628566 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
NR1I3-235ENST00000628566 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
NR1I3-235ENST00000628566 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
NR1I3-235ENST00000628566 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 80.4 ms