RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 SPRR2EP22531 72 aa5.25□□□□□ -1.57
SOX2-OT-248ENST00000628496 SPRR2BP35325 72 aa5.25□□□□□ -1.57
SOX2-OT-248ENST00000628496 SPRR2AP35326 72 aa5.25□□□□□ -1.57
SOX2-OT-248ENST00000628496 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
SOX2-OT-248ENST00000628496 Q1T7F1 81 aa5.21□□□□□ -1.58
SOX2-OT-248ENST00000628496 UQCR11O14957 56 aa5.19□□□□□ -1.58
SOX2-OT-248ENST00000628496 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
SOX2-OT-248ENST00000628496 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
SOX2-OT-248ENST00000628496 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
SOX2-OT-248ENST00000628496 PSPHP1O15172 72 aa5.12□□□□□ -1.59
SOX2-OT-248ENST00000628496 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
SOX2-OT-248ENST00000628496 MIR22HGQ0VDD5 57 aa5.1□□□□□ -1.59
SOX2-OT-248ENST00000628496 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
SOX2-OT-248ENST00000628496 SPRR2DP22532 72 aa5.07□□□□□ -1.6
SOX2-OT-248ENST00000628496 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
SOX2-OT-248ENST00000628496 MT1EP04732 61 aa5.05□□□□□ -1.6
SOX2-OT-248ENST00000628496 TNP1P09430 55 aa5.04□□□□□ -1.6
SOX2-OT-248ENST00000628496 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
SOX2-OT-248ENST00000628496 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
SOX2-OT-248ENST00000628496 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
SOX2-OT-248ENST00000628496 A6NED7 52 aa4.94□□□□□ -1.62
SOX2-OT-248ENST00000628496 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
SOX2-OT-248ENST00000628496 K7ERS5 55 aa4.93□□□□□ -1.62
SOX2-OT-248ENST00000628496 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
SOX2-OT-248ENST00000628496 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
SOX2-OT-248ENST00000628496 MT1LQ93083 61 aa4.86□□□□□ -1.63
SOX2-OT-248ENST00000628496 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
SOX2-OT-248ENST00000628496 MT1GP13640 62 aa4.84□□□□□ -1.63
SOX2-OT-248ENST00000628496 MT3P25713 68 aa4.84□□□□□ -1.63
SOX2-OT-248ENST00000628496 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
SOX2-OT-248ENST00000628496 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
SOX2-OT-248ENST00000628496 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
SOX2-OT-248ENST00000628496 MT1MQ8N339 61 aa4.79□□□□□ -1.64
SOX2-OT-248ENST00000628496 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
SOX2-OT-248ENST00000628496 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
SOX2-OT-248ENST00000628496 ROMO1P60602 79 aa4.67□□□□□ -1.66
SOX2-OT-248ENST00000628496 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
SOX2-OT-248ENST00000628496 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
SOX2-OT-248ENST00000628496 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
SOX2-OT-248ENST00000628496 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
SOX2-OT-248ENST00000628496 MT4P47944 62 aa4.43□□□□□ -1.7
SOX2-OT-248ENST00000628496 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
SOX2-OT-248ENST00000628496 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
SOX2-OT-248ENST00000628496 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.72
SOX2-OT-248ENST00000628496 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
SOX2-OT-248ENST00000628496 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
SOX2-OT-248ENST00000628496 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
SOX2-OT-248ENST00000628496 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
SOX2-OT-248ENST00000628496 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
SOX2-OT-248ENST00000628496 MT1AP04731 61 aa4.12□□□□□ -1.75
SOX2-OT-248ENST00000628496 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
SOX2-OT-248ENST00000628496 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
SOX2-OT-248ENST00000628496 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
SOX2-OT-248ENST00000628496 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
SOX2-OT-248ENST00000628496 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
SOX2-OT-248ENST00000628496 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
SOX2-OT-248ENST00000628496 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
SOX2-OT-248ENST00000628496 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
SOX2-OT-248ENST00000628496 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
SOX2-OT-248ENST00000628496 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
SOX2-OT-248ENST00000628496 INE1O15225 51 aa3.78□□□□□ -1.8
SOX2-OT-248ENST00000628496 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
SOX2-OT-248ENST00000628496 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
SOX2-OT-248ENST00000628496 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
SOX2-OT-248ENST00000628496 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
SOX2-OT-248ENST00000628496 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
SOX2-OT-248ENST00000628496 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
SOX2-OT-248ENST00000628496 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
SOX2-OT-248ENST00000628496 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
SOX2-OT-248ENST00000628496 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
SOX2-OT-248ENST00000628496 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
SOX2-OT-248ENST00000628496 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
SOX2-OT-248ENST00000628496 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SOX2-OT-248ENST00000628496 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SOX2-OT-248ENST00000628496 PRM1P04553 51 aa2.41□□□□□ -2.02
SOX2-OT-248ENST00000628496 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SOX2-OT-248ENST00000628496 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
SOX2-OT-248ENST00000628496 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 64 ms