RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 A0A1B0GU33 70 aa4.78□□□□□ -1.64
SOX2-OT-241ENST00000626948 MT4P47944 62 aa4.77□□□□□ -1.65
SOX2-OT-241ENST00000626948 SERP1Q9Y6X1 66 aa4.77□□□□□ -1.65
SOX2-OT-241ENST00000626948 SEC61GP60059 68 aa4.75□□□□□ -1.65
SOX2-OT-241ENST00000626948 PP632Q6XCG6 107 aa4.74□□□□□ -1.65
SOX2-OT-241ENST00000626948 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
SOX2-OT-241ENST00000626948 LCE3AQ5TA76 89 aa4.73□□□□□ -1.65
SOX2-OT-241ENST00000626948 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
SOX2-OT-241ENST00000626948 A8MU10 97 aa4.71□□□□□ -1.66
SOX2-OT-241ENST00000626948 H7BZZ5 65 aa4.71□□□□□ -1.66
SOX2-OT-241ENST00000626948 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.66
SOX2-OT-241ENST00000626948 COX7CP15954 63 aa4.68□□□□□ -1.66
SOX2-OT-241ENST00000626948 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
SOX2-OT-241ENST00000626948 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
SOX2-OT-241ENST00000626948 PRAC1Q96KF2 57 aa4.64□□□□□ -1.67
SOX2-OT-241ENST00000626948 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
SOX2-OT-241ENST00000626948 SMIM26A0A096LP01 95 aa4.6□□□□□ -1.67
SOX2-OT-241ENST00000626948 A0A1B0GU69 56 aa4.59□□□□□ -1.67
SOX2-OT-241ENST00000626948 TNP1P09430 55 aa4.58□□□□□ -1.68
SOX2-OT-241ENST00000626948 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
SOX2-OT-241ENST00000626948 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
SOX2-OT-241ENST00000626948 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
SOX2-OT-241ENST00000626948 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
SOX2-OT-241ENST00000626948 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
SOX2-OT-241ENST00000626948 CCDC179H3BU77 68 aa4.4□□□□□ -1.71
SOX2-OT-241ENST00000626948 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
SOX2-OT-241ENST00000626948 ANAPC13Q9BS18 74 aa4.37□□□□□ -1.71
SOX2-OT-241ENST00000626948 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
SOX2-OT-241ENST00000626948 PRR15LQ9BU68 103 aa4.32□□□□□ -1.72
SOX2-OT-241ENST00000626948 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
SOX2-OT-241ENST00000626948 ATP5EP56381 51 aaPredicted RBP4.25□□□□□ -1.73
SOX2-OT-241ENST00000626948 UQCR11O14957 56 aa4.24□□□□□ -1.73
SOX2-OT-241ENST00000626948 KRTAP25-1Q3LHN0 102 aa4.23□□□□□ -1.73
SOX2-OT-241ENST00000626948 V9GYY9 64 aa4.2□□□□□ -1.74
SOX2-OT-241ENST00000626948 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
SOX2-OT-241ENST00000626948 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
SOX2-OT-241ENST00000626948 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
SOX2-OT-241ENST00000626948 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
SOX2-OT-241ENST00000626948 TMEM258P61165 79 aa4.11□□□□□ -1.75
SOX2-OT-241ENST00000626948 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
SOX2-OT-241ENST00000626948 MT1AP04731 61 aa4.07□□□□□ -1.76
SOX2-OT-241ENST00000626948 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
SOX2-OT-241ENST00000626948 PSPHP1O15172 72 aa4.01□□□□□ -1.77
SOX2-OT-241ENST00000626948 KRTAP5-8O75690 187 aa4□□□□□ -1.77
SOX2-OT-241ENST00000626948 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
SOX2-OT-241ENST00000626948 K7ERS5 55 aa3.97□□□□□ -1.77
SOX2-OT-241ENST00000626948 Q1T7F1 81 aa3.93□□□□□ -1.78
SOX2-OT-241ENST00000626948 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
SOX2-OT-241ENST00000626948 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
SOX2-OT-241ENST00000626948 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.78
SOX2-OT-241ENST00000626948 MUC5ACP98088 5654 aa3.9□□□□□ -1.79
SOX2-OT-241ENST00000626948 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
SOX2-OT-241ENST00000626948 PRO0628Q9UI54 55 aa3.8□□□□□ -1.8
SOX2-OT-241ENST00000626948 A6NED7 52 aa3.79□□□□□ -1.8
SOX2-OT-241ENST00000626948 ROMO1P60602 79 aa3.79□□□□□ -1.8
SOX2-OT-241ENST00000626948 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
SOX2-OT-241ENST00000626948 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
SOX2-OT-241ENST00000626948 MT3P25713 68 aa3.7□□□□□ -1.82
SOX2-OT-241ENST00000626948 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
SOX2-OT-241ENST00000626948 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
SOX2-OT-241ENST00000626948 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
SOX2-OT-241ENST00000626948 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
SOX2-OT-241ENST00000626948 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
SOX2-OT-241ENST00000626948 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
SOX2-OT-241ENST00000626948 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
SOX2-OT-241ENST00000626948 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
SOX2-OT-241ENST00000626948 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
SOX2-OT-241ENST00000626948 KTN1-AS1Q86SY8 53 aa3.02□□□□□ -1.93
SOX2-OT-241ENST00000626948 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
SOX2-OT-241ENST00000626948 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
SOX2-OT-241ENST00000626948 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
SOX2-OT-241ENST00000626948 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
SOX2-OT-241ENST00000626948 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
SOX2-OT-241ENST00000626948 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
SOX2-OT-241ENST00000626948 INE1O15225 51 aa2.33□□□□□ -2.04
SOX2-OT-241ENST00000626948 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
SOX2-OT-241ENST00000626948 PRM1P04553 51 aa1.96□□□□□ -2.1
SOX2-OT-241ENST00000626948 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 69.4 ms