RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 LCE3AQ5TA76 89 aa7.32□□□□□ -1.24
PNKP-219ENST00000626274 KRTAP19-3Q7Z4W3 81 aa7.32□□□□□ -1.24
PNKP-219ENST00000626274 LCE3BQ5TA77 95 aa7.3□□□□□ -1.24
PNKP-219ENST00000626274 LCE5AQ5TCM9 118 aa7.3□□□□□ -1.24
PNKP-219ENST00000626274 MT1GP13640 62 aa7.19□□□□□ -1.26
PNKP-219ENST00000626274 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
PNKP-219ENST00000626274 CDC42SE1Q9NRR8 79 aa7.15□□□□□ -1.26
PNKP-219ENST00000626274 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
PNKP-219ENST00000626274 MT1LQ93083 61 aa7.13□□□□□ -1.27
PNKP-219ENST00000626274 DSTQ03001 7570 aaKnown RBP7.12□□□□□ -1.27
PNKP-219ENST00000626274 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
PNKP-219ENST00000626274 KRTAP12-3P60328 96 aa7.06□□□□□ -1.28
PNKP-219ENST00000626274 MT1MQ8N339 61 aa7.05□□□□□ -1.28
PNKP-219ENST00000626274 BRK1Q8WUW1 75 aa6.88□□□□□ -1.31
PNKP-219ENST00000626274 KRTAP4-3Q9BYR4 195 aa6.87□□□□□ -1.31
PNKP-219ENST00000626274 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
PNKP-219ENST00000626274 ROMO1P60602 79 aa6.86□□□□□ -1.31
PNKP-219ENST00000626274 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
PNKP-219ENST00000626274 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
PNKP-219ENST00000626274 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
PNKP-219ENST00000626274 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
PNKP-219ENST00000626274 LCE4AQ5TA78 99 aa6.68□□□□□ -1.34
PNKP-219ENST00000626274 LCE1DQ5T752 114 aa6.59□□□□□ -1.35
PNKP-219ENST00000626274 KRTAP5-4Q6L8H1 288 aa6.59□□□□□ -1.35
PNKP-219ENST00000626274 MT4P47944 62 aa6.56□□□□□ -1.36
PNKP-219ENST00000626274 PMAIP1Q13794 54 aa6.52□□□□□ -1.37
PNKP-219ENST00000626274 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
PNKP-219ENST00000626274 PRO0628Q9UI54 55 aa6.52□□□□□ -1.37
PNKP-219ENST00000626274 KRTAP5-5Q701N2 237 aaPredicted RBP6.43□□□□□ -1.38
PNKP-219ENST00000626274 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
PNKP-219ENST00000626274 HMCN1Q96RW7 5635 aa6.41□□□□□ -1.38
PNKP-219ENST00000626274 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
PNKP-219ENST00000626274 GPR98Q8WXG9 6306 aa6.33□□□□□ -1.4
PNKP-219ENST00000626274 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
PNKP-219ENST00000626274 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
PNKP-219ENST00000626274 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
PNKP-219ENST00000626274 SYNE1Q8NF91 8797 aaKnown RBP6.18□□□□□ -1.42
PNKP-219ENST00000626274 AHNAK2Q8IVF2 5795 aa6.14□□□□□ -1.43
PNKP-219ENST00000626274 KRTAP9-6A8MVA2 160 aa6.12□□□□□ -1.43
PNKP-219ENST00000626274 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
PNKP-219ENST00000626274 MT1AP04731 61 aa6.09□□□□□ -1.43
PNKP-219ENST00000626274 PRAC1Q96KF2 57 aa6.06□□□□□ -1.44
PNKP-219ENST00000626274 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
PNKP-219ENST00000626274 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
PNKP-219ENST00000626274 KRTAP5-10Q6L8G5 202 aa5.99□□□□□ -1.45
PNKP-219ENST00000626274 KRTAP4-12Q9BQ66 201 aa5.86□□□□□ -1.47
PNKP-219ENST00000626274 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
PNKP-219ENST00000626274 KRTAP5-2Q701N4 177 aa5.81□□□□□ -1.48
PNKP-219ENST00000626274 KRTAP5-7Q6L8G8 165 aa5.74□□□□□ -1.49
PNKP-219ENST00000626274 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
PNKP-219ENST00000626274 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
PNKP-219ENST00000626274 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
PNKP-219ENST00000626274 MT3P25713 68 aa5.56□□□□□ -1.52
PNKP-219ENST00000626274 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
PNKP-219ENST00000626274 KRTAP5-8O75690 187 aa5.41□□□□□ -1.54
PNKP-219ENST00000626274 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
PNKP-219ENST00000626274 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
PNKP-219ENST00000626274 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
PNKP-219ENST00000626274 LCE1EQ5T753 118 aa5.05□□□□□ -1.6
PNKP-219ENST00000626274 MUC5ACP98088 5654 aa5.01□□□□□ -1.61
PNKP-219ENST00000626274 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
PNKP-219ENST00000626274 AHNAKQ09666 5890 aaKnown RBP4.99□□□□□ -1.61
PNKP-219ENST00000626274 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
PNKP-219ENST00000626274 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
PNKP-219ENST00000626274 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
PNKP-219ENST00000626274 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
PNKP-219ENST00000626274 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
PNKP-219ENST00000626274 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
PNKP-219ENST00000626274 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
PNKP-219ENST00000626274 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
PNKP-219ENST00000626274 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
PNKP-219ENST00000626274 INE1O15225 51 aa3.88□□□□□ -1.79
PNKP-219ENST00000626274 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
PNKP-219ENST00000626274 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
PNKP-219ENST00000626274 PRM1P04553 51 aa3.51□□□□□ -1.85
PNKP-219ENST00000626274 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.88
PNKP-219ENST00000626274 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
PNKP-219ENST00000626274 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 102.9 ms