RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 SPRR2EP22531 72 aa6.04□□□□□ -1.44
CCNA1-203ENST00000625767 SPRR2BP35325 72 aa6.04□□□□□ -1.44
CCNA1-203ENST00000625767 SPRR2AP35326 72 aa6.04□□□□□ -1.44
CCNA1-203ENST00000625767 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
CCNA1-203ENST00000625767 PRAC1Q96KF2 57 aa5.94□□□□□ -1.46
CCNA1-203ENST00000625767 MT1LQ93083 61 aa5.94□□□□□ -1.46
CCNA1-203ENST00000625767 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
CCNA1-203ENST00000625767 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
CCNA1-203ENST00000625767 MT1GP13640 62 aa5.82□□□□□ -1.48
CCNA1-203ENST00000625767 SPRR2DP22532 72 aa5.82□□□□□ -1.48
CCNA1-203ENST00000625767 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
CCNA1-203ENST00000625767 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
CCNA1-203ENST00000625767 MT1MQ8N339 61 aa5.79□□□□□ -1.48
CCNA1-203ENST00000625767 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
CCNA1-203ENST00000625767 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
CCNA1-203ENST00000625767 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
CCNA1-203ENST00000625767 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
CCNA1-203ENST00000625767 H3BS24 57 aa5.72□□□□□ -1.49
CCNA1-203ENST00000625767 KRTAP4-12Q9BQ66 201 aa5.67□□□□□ -1.5
CCNA1-203ENST00000625767 KRTAP9-9Q9BYP9 154 aa5.66□□□□□ -1.5
CCNA1-203ENST00000625767 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
CCNA1-203ENST00000625767 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
CCNA1-203ENST00000625767 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
CCNA1-203ENST00000625767 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
CCNA1-203ENST00000625767 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
CCNA1-203ENST00000625767 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
CCNA1-203ENST00000625767 A0A0A0MQY5 61 aa5.46□□□□□ -1.54
CCNA1-203ENST00000625767 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
CCNA1-203ENST00000625767 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
CCNA1-203ENST00000625767 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
CCNA1-203ENST00000625767 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
CCNA1-203ENST00000625767 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
CCNA1-203ENST00000625767 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
CCNA1-203ENST00000625767 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
CCNA1-203ENST00000625767 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.57
CCNA1-203ENST00000625767 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
CCNA1-203ENST00000625767 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
CCNA1-203ENST00000625767 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
CCNA1-203ENST00000625767 MT4P47944 62 aa5.1□□□□□ -1.59
CCNA1-203ENST00000625767 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
CCNA1-203ENST00000625767 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
CCNA1-203ENST00000625767 MT1AP04731 61 aa5.02□□□□□ -1.61
CCNA1-203ENST00000625767 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
CCNA1-203ENST00000625767 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
CCNA1-203ENST00000625767 KRTAP12-4P60329 112 aa4.9□□□□□ -1.62
CCNA1-203ENST00000625767 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
CCNA1-203ENST00000625767 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
CCNA1-203ENST00000625767 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
CCNA1-203ENST00000625767 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.67
CCNA1-203ENST00000625767 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
CCNA1-203ENST00000625767 MT3P25713 68 aa4.54□□□□□ -1.68
CCNA1-203ENST00000625767 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
CCNA1-203ENST00000625767 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
CCNA1-203ENST00000625767 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
CCNA1-203ENST00000625767 KRTAP5-10Q6L8G5 202 aa4.41□□□□□ -1.7
CCNA1-203ENST00000625767 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
CCNA1-203ENST00000625767 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CCNA1-203ENST00000625767 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
CCNA1-203ENST00000625767 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
CCNA1-203ENST00000625767 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
CCNA1-203ENST00000625767 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
CCNA1-203ENST00000625767 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
CCNA1-203ENST00000625767 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.8
CCNA1-203ENST00000625767 INE1O15225 51 aa3.76□□□□□ -1.81
CCNA1-203ENST00000625767 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
CCNA1-203ENST00000625767 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
CCNA1-203ENST00000625767 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
CCNA1-203ENST00000625767 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
CCNA1-203ENST00000625767 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CCNA1-203ENST00000625767 PRM1P04553 51 aa3.35□□□□□ -1.87
CCNA1-203ENST00000625767 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
CCNA1-203ENST00000625767 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
CCNA1-203ENST00000625767 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
CCNA1-203ENST00000625767 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
CCNA1-203ENST00000625767 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
CCNA1-203ENST00000625767 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
CCNA1-203ENST00000625767 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 103.5 ms