RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 CRCT1Q9UGL9 99 aa3.54□□□□□ -1.84
SOX9-AS1-217ENST00000623935 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
SOX9-AS1-217ENST00000623935 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
SOX9-AS1-217ENST00000623935 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
SOX9-AS1-217ENST00000623935 TNP1P09430 55 aa3.47□□□□□ -1.85
SOX9-AS1-217ENST00000623935 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
SOX9-AS1-217ENST00000623935 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
SOX9-AS1-217ENST00000623935 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
SOX9-AS1-217ENST00000623935 MT3P25713 68 aa3.4□□□□□ -1.87
SOX9-AS1-217ENST00000623935 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
SOX9-AS1-217ENST00000623935 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
SOX9-AS1-217ENST00000623935 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
SOX9-AS1-217ENST00000623935 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
SOX9-AS1-217ENST00000623935 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
SOX9-AS1-217ENST00000623935 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
SOX9-AS1-217ENST00000623935 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
SOX9-AS1-217ENST00000623935 KMT2DO14686 5537 aa3.25□□□□□ -1.89
SOX9-AS1-217ENST00000623935 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.89
SOX9-AS1-217ENST00000623935 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
SOX9-AS1-217ENST00000623935 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
SOX9-AS1-217ENST00000623935 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
SOX9-AS1-217ENST00000623935 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
SOX9-AS1-217ENST00000623935 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.91
SOX9-AS1-217ENST00000623935 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
SOX9-AS1-217ENST00000623935 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
SOX9-AS1-217ENST00000623935 MT1EP04732 61 aa3.11□□□□□ -1.91
SOX9-AS1-217ENST00000623935 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
SOX9-AS1-217ENST00000623935 INE1O15225 51 aa3.06□□□□□ -1.92
SOX9-AS1-217ENST00000623935 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
SOX9-AS1-217ENST00000623935 SPRR2EP22531 72 aa3.04□□□□□ -1.92
SOX9-AS1-217ENST00000623935 SPRR2BP35325 72 aa3.04□□□□□ -1.92
SOX9-AS1-217ENST00000623935 SPRR2AP35326 72 aa3.04□□□□□ -1.92
SOX9-AS1-217ENST00000623935 KRTAP19-3Q7Z4W3 81 aa3.04□□□□□ -1.92
SOX9-AS1-217ENST00000623935 MT1LQ93083 61 aa3.04□□□□□ -1.92
SOX9-AS1-217ENST00000623935 MT1GP13640 62 aa3.02□□□□□ -1.93
SOX9-AS1-217ENST00000623935 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
SOX9-AS1-217ENST00000623935 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
SOX9-AS1-217ENST00000623935 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
SOX9-AS1-217ENST00000623935 SPRR2DP22532 72 aa2.95□□□□□ -1.94
SOX9-AS1-217ENST00000623935 MT1MQ8N339 61 aa2.95□□□□□ -1.94
SOX9-AS1-217ENST00000623935 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
SOX9-AS1-217ENST00000623935 KRTAP4-3Q9BYR4 195 aa2.9□□□□□ -1.95
SOX9-AS1-217ENST00000623935 NEBP20929 6669 aa2.87□□□□□ -1.95
SOX9-AS1-217ENST00000623935 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
SOX9-AS1-217ENST00000623935 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
SOX9-AS1-217ENST00000623935 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
SOX9-AS1-217ENST00000623935 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
SOX9-AS1-217ENST00000623935 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.97
SOX9-AS1-217ENST00000623935 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
SOX9-AS1-217ENST00000623935 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
SOX9-AS1-217ENST00000623935 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
SOX9-AS1-217ENST00000623935 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
SOX9-AS1-217ENST00000623935 MT1AP04731 61 aa2.6□□□□□ -1.99
SOX9-AS1-217ENST00000623935 KRTAP12-4P60329 112 aa2.57□□□□□ -2
SOX9-AS1-217ENST00000623935 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
SOX9-AS1-217ENST00000623935 MT4P47944 62 aa2.54□□□□□ -2
SOX9-AS1-217ENST00000623935 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
SOX9-AS1-217ENST00000623935 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.01
SOX9-AS1-217ENST00000623935 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
SOX9-AS1-217ENST00000623935 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
SOX9-AS1-217ENST00000623935 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
SOX9-AS1-217ENST00000623935 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
SOX9-AS1-217ENST00000623935 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
SOX9-AS1-217ENST00000623935 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
SOX9-AS1-217ENST00000623935 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
SOX9-AS1-217ENST00000623935 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
SOX9-AS1-217ENST00000623935 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
SOX9-AS1-217ENST00000623935 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
SOX9-AS1-217ENST00000623935 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
SOX9-AS1-217ENST00000623935 PRM1P04553 51 aa1.9□□□□□ -2.1
SOX9-AS1-217ENST00000623935 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
SOX9-AS1-217ENST00000623935 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
SOX9-AS1-217ENST00000623935 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
SOX9-AS1-217ENST00000623935 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
SOX9-AS1-217ENST00000623935 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
SOX9-AS1-217ENST00000623935 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
SOX9-AS1-217ENST00000623935 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 78.9 ms