RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 DSTQ03001 7570 aaKnown RBP7.75□□□□□ -1.17
PCDHB4-202ENST00000623478 PSPHP1O15172 72 aa7.73□□□□□ -1.17
PCDHB4-202ENST00000623478 H3BS24 57 aa7.72□□□□□ -1.17
PCDHB4-202ENST00000623478 KRTAP19-3Q7Z4W3 81 aa7.72□□□□□ -1.17
PCDHB4-202ENST00000623478 UQCR11O14957 56 aa7.68□□□□□ -1.18
PCDHB4-202ENST00000623478 KRTAP19-5Q3LI72 72 aa7.68□□□□□ -1.18
PCDHB4-202ENST00000623478 KRTAP4-9Q9BYQ8 210 aa7.68□□□□□ -1.18
PCDHB4-202ENST00000623478 MIR22HGQ0VDD5 57 aa7.57□□□□□ -1.2
PCDHB4-202ENST00000623478 KRTAP19-4Q3LI73 84 aa7.57□□□□□ -1.2
PCDHB4-202ENST00000623478 C10orf95Q9H7T3 257 aa7.57□□□□□ -1.2
PCDHB4-202ENST00000623478 MT1GP13640 62 aa7.52□□□□□ -1.21
PCDHB4-202ENST00000623478 LCE3AQ5TA76 89 aa7.51□□□□□ -1.21
PCDHB4-202ENST00000623478 KRTAP4-2Q9BYR5 136 aa7.51□□□□□ -1.21
PCDHB4-202ENST00000623478 TNP1P09430 55 aa7.49□□□□□ -1.21
PCDHB4-202ENST00000623478 A6NED7 52 aa7.47□□□□□ -1.21
PCDHB4-202ENST00000623478 MT1LQ93083 61 aa7.46□□□□□ -1.22
PCDHB4-202ENST00000623478 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
PCDHB4-202ENST00000623478 MT1MQ8N339 61 aa7.43□□□□□ -1.22
PCDHB4-202ENST00000623478 KRTAP4-11Q9BYQ6 195 aa7.41□□□□□ -1.22
PCDHB4-202ENST00000623478 GPR98Q8WXG9 6306 aa7.36□□□□□ -1.23
PCDHB4-202ENST00000623478 CDC42SE1Q9NRR8 79 aa7.34□□□□□ -1.23
PCDHB4-202ENST00000623478 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
PCDHB4-202ENST00000623478 HMCN1Q96RW7 5635 aa7.21□□□□□ -1.26
PCDHB4-202ENST00000623478 K7ERS5 55 aa7.21□□□□□ -1.26
PCDHB4-202ENST00000623478 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
PCDHB4-202ENST00000623478 MT4P47944 62 aa7.15□□□□□ -1.26
PCDHB4-202ENST00000623478 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
PCDHB4-202ENST00000623478 KRTAP5-4Q6L8H1 288 aa7.06□□□□□ -1.28
PCDHB4-202ENST00000623478 BRK1Q8WUW1 75 aa7.05□□□□□ -1.28
PCDHB4-202ENST00000623478 AHNAK2Q8IVF2 5795 aa6.95□□□□□ -1.3
PCDHB4-202ENST00000623478 ROMO1P60602 79 aa6.94□□□□□ -1.3
PCDHB4-202ENST00000623478 KRTAP5-5Q701N2 237 aaPredicted RBP6.81□□□□□ -1.32
PCDHB4-202ENST00000623478 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
PCDHB4-202ENST00000623478 PRO0628Q9UI54 55 aa6.72□□□□□ -1.33
PCDHB4-202ENST00000623478 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.34
PCDHB4-202ENST00000623478 KRTAP5-10Q6L8G5 202 aa6.7□□□□□ -1.34
PCDHB4-202ENST00000623478 KRTAP20-2Q3LI61 65 aa6.68□□□□□ -1.34
PCDHB4-202ENST00000623478 PMAIP1Q13794 54 aa6.66□□□□□ -1.34
PCDHB4-202ENST00000623478 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
PCDHB4-202ENST00000623478 KRTAP5-3Q6L8H2 238 aa6.64□□□□□ -1.35
PCDHB4-202ENST00000623478 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
PCDHB4-202ENST00000623478 SPRR5A0A1B0GTR4 108 aa6.61□□□□□ -1.35
PCDHB4-202ENST00000623478 KRTAP12-4P60329 112 aa6.6□□□□□ -1.35
PCDHB4-202ENST00000623478 KRTAP5-7Q6L8G8 165 aa6.42□□□□□ -1.38
PCDHB4-202ENST00000623478 SVIPQ8NHG7 77 aa6.36□□□□□ -1.39
PCDHB4-202ENST00000623478 PRAC1Q96KF2 57 aa6.34□□□□□ -1.39
PCDHB4-202ENST00000623478 MT1AP04731 61 aa6.33□□□□□ -1.4
PCDHB4-202ENST00000623478 KRTAP6-1Q3LI64 71 aa6.32□□□□□ -1.4
PCDHB4-202ENST00000623478 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
PCDHB4-202ENST00000623478 KTN1-AS1Q86SY8 53 aa6.27□□□□□ -1.41
PCDHB4-202ENST00000623478 KRTAP5-2Q701N4 177 aa6.2□□□□□ -1.42
PCDHB4-202ENST00000623478 KRTAP6-2Q3LI66 62 aa6.04□□□□□ -1.44
PCDHB4-202ENST00000623478 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
PCDHB4-202ENST00000623478 KRTAP5-8O75690 187 aa5.9□□□□□ -1.46
PCDHB4-202ENST00000623478 MT3P25713 68 aa5.77□□□□□ -1.49
PCDHB4-202ENST00000623478 AHNAKQ09666 5890 aaKnown RBP5.73□□□□□ -1.49
PCDHB4-202ENST00000623478 MUC5BQ9HC84 5762 aaPredicted RBP5.71□□□□□ -1.49
PCDHB4-202ENST00000623478 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
PCDHB4-202ENST00000623478 KRTAP5-1Q6L8H4 278 aa5.56□□□□□ -1.52
PCDHB4-202ENST00000623478 LCE1EQ5T753 118 aa5.29□□□□□ -1.56
PCDHB4-202ENST00000623478 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
PCDHB4-202ENST00000623478 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
PCDHB4-202ENST00000623478 KRTAP5-11Q6L8G4 156 aa5.02□□□□□ -1.61
PCDHB4-202ENST00000623478 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.99□□□□□ -1.61
PCDHB4-202ENST00000623478 LCE1CQ5T751 118 aa4.92□□□□□ -1.62
PCDHB4-202ENST00000623478 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
PCDHB4-202ENST00000623478 NDUFAF8A1L188 74 aa4.75□□□□□ -1.65
PCDHB4-202ENST00000623478 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
PCDHB4-202ENST00000623478 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
PCDHB4-202ENST00000623478 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
PCDHB4-202ENST00000623478 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
PCDHB4-202ENST00000623478 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
PCDHB4-202ENST00000623478 INE1O15225 51 aa3.92□□□□□ -1.78
PCDHB4-202ENST00000623478 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
PCDHB4-202ENST00000623478 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
PCDHB4-202ENST00000623478 PRM1P04553 51 aa3.59□□□□□ -1.83
PCDHB4-202ENST00000623478 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
PCDHB4-202ENST00000623478 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 49.2 ms