RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 SPRR2BP35325 72 aa2.61□□□□□ -1.99
EBF1-211ENST00000622875 SPRR2AP35326 72 aa2.61□□□□□ -1.99
EBF1-211ENST00000622875 LOC100996750A0A140TA64 210 aa2.6□□□□□ -1.99
EBF1-211ENST00000622875 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
EBF1-211ENST00000622875 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
EBF1-211ENST00000622875 LCE3BQ5TA77 95 aa2.56□□□□□ -2
EBF1-211ENST00000622875 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
EBF1-211ENST00000622875 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
EBF1-211ENST00000622875 SPRR2DP22532 72 aa2.55□□□□□ -2
EBF1-211ENST00000622875 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
EBF1-211ENST00000622875 KRTAP9-4Q9BYQ2 154 aa2.54□□□□□ -2
EBF1-211ENST00000622875 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
EBF1-211ENST00000622875 KRTAP10-10P60014 251 aa2.52□□□□□ -2.01
EBF1-211ENST00000622875 KRTAP3-1Q9BYR8 98 aa2.5□□□□□ -2.01
EBF1-211ENST00000622875 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
EBF1-211ENST00000622875 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
EBF1-211ENST00000622875 KRTAP10-7P60409 375 aaPredicted RBP2.47□□□□□ -2.01
EBF1-211ENST00000622875 KRTAP4-9Q9BYQ8 210 aa2.47□□□□□ -2.01
EBF1-211ENST00000622875 SPRR2FQ96RM1 72 aa2.45□□□□□ -2.02
EBF1-211ENST00000622875 MT3P25713 68 aa2.43□□□□□ -2.02
EBF1-211ENST00000622875 LCE1DQ5T752 114 aa2.42□□□□□ -2.02
EBF1-211ENST00000622875 LCE5AQ5TCM9 118 aa2.41□□□□□ -2.02
EBF1-211ENST00000622875 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
EBF1-211ENST00000622875 KRTAP10-5P60370 271 aa2.39□□□□□ -2.03
EBF1-211ENST00000622875 LCE4AQ5TA78 99 aa2.37□□□□□ -2.03
EBF1-211ENST00000622875 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
EBF1-211ENST00000622875 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.04
EBF1-211ENST00000622875 KRTAP4-8Q9BYQ9 185 aa2.31□□□□□ -2.04
EBF1-211ENST00000622875 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
EBF1-211ENST00000622875 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
EBF1-211ENST00000622875 MT1BP07438 61 aa2.27□□□□□ -2.05
EBF1-211ENST00000622875 KRTAP8-1Q8IUC2 63 aa2.24□□□□□ -2.05
EBF1-211ENST00000622875 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
EBF1-211ENST00000622875 MT4P47944 62 aa2.2□□□□□ -2.06
EBF1-211ENST00000622875 KRTAP4-12Q9BQ66 201 aa2.2□□□□□ -2.06
EBF1-211ENST00000622875 LCE3CQ5T5A8 94 aa2.18□□□□□ -2.06
EBF1-211ENST00000622875 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
EBF1-211ENST00000622875 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
EBF1-211ENST00000622875 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
EBF1-211ENST00000622875 KRTAP4-8A0A0G2JLE6 195 aa2.14□□□□□ -2.07
EBF1-211ENST00000622875 LCE3AQ5TA76 89 aa2.11□□□□□ -2.07
EBF1-211ENST00000622875 KRTAP4-7Q9BYR0 210 aa2.1□□□□□ -2.07
EBF1-211ENST00000622875 KRTAP10-12P60413 245 aa2.09□□□□□ -2.08
EBF1-211ENST00000622875 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
EBF1-211ENST00000622875 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
EBF1-211ENST00000622875 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.09
EBF1-211ENST00000622875 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
EBF1-211ENST00000622875 KRTAP4-11Q9BYQ6 195 aa2.01□□□□□ -2.09
EBF1-211ENST00000622875 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
EBF1-211ENST00000622875 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
EBF1-211ENST00000622875 MT1XP80297 61 aa1.94□□□□□ -2.1
EBF1-211ENST00000622875 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
EBF1-211ENST00000622875 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.1
EBF1-211ENST00000622875 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
EBF1-211ENST00000622875 MT1GP13640 62 aa1.79□□□□□ -2.12
EBF1-211ENST00000622875 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
EBF1-211ENST00000622875 MT1EP04732 61 aa1.78□□□□□ -2.12
EBF1-211ENST00000622875 PRM1P04553 51 aa1.76□□□□□ -2.13
EBF1-211ENST00000622875 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
EBF1-211ENST00000622875 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
EBF1-211ENST00000622875 MT1MQ8N339 61 aa1.73□□□□□ -2.13
EBF1-211ENST00000622875 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
EBF1-211ENST00000622875 KRTAP4-3Q9BYR4 195 aa1.7□□□□□ -2.14
EBF1-211ENST00000622875 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
EBF1-211ENST00000622875 MT1AP04731 61 aa1.64□□□□□ -2.15
EBF1-211ENST00000622875 MT1LQ93083 61 aa1.6□□□□□ -2.15
EBF1-211ENST00000622875 KRTAP9-6A8MVA2 160 aa1.58□□□□□ -2.16
EBF1-211ENST00000622875 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
EBF1-211ENST00000622875 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
EBF1-211ENST00000622875 KRTAP6-2Q3LI66 62 aa1.47□□□□□ -2.17
EBF1-211ENST00000622875 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
EBF1-211ENST00000622875 KRTAP6-1Q3LI64 71 aa1.37□□□□□ -2.19
EBF1-211ENST00000622875 LCE1CQ5T751 118 aa1.33□□□□□ -2.2
EBF1-211ENST00000622875 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
EBF1-211ENST00000622875 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
EBF1-211ENST00000622875 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
EBF1-211ENST00000622875 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 67.9 ms