RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 KRTAP10-5P60370 271 aa2.89□□□□□ -1.95
CBWD3-219ENST00000622817 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
CBWD3-219ENST00000622817 TNP1P09430 55 aa2.86□□□□□ -1.95
CBWD3-219ENST00000622817 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
CBWD3-219ENST00000622817 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
CBWD3-219ENST00000622817 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
CBWD3-219ENST00000622817 MT3P25713 68 aa2.81□□□□□ -1.96
CBWD3-219ENST00000622817 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
CBWD3-219ENST00000622817 FSIP2Q5CZC0 6907 aa2.76□□□□□ -1.97
CBWD3-219ENST00000622817 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
CBWD3-219ENST00000622817 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
CBWD3-219ENST00000622817 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
CBWD3-219ENST00000622817 CRCT1Q9UGL9 99 aa2.72□□□□□ -1.97
CBWD3-219ENST00000622817 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
CBWD3-219ENST00000622817 FCGBPQ9Y6R7 5405 aaPredicted RBP2.7□□□□□ -1.98
CBWD3-219ENST00000622817 KRTAP8-1Q8IUC2 63 aa2.68□□□□□ -1.98
CBWD3-219ENST00000622817 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
CBWD3-219ENST00000622817 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
CBWD3-219ENST00000622817 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
CBWD3-219ENST00000622817 KRTAP19-5Q3LI72 72 aa2.62□□□□□ -1.99
CBWD3-219ENST00000622817 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
CBWD3-219ENST00000622817 KMT2DO14686 5537 aa2.59□□□□□ -1.99
CBWD3-219ENST00000622817 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
CBWD3-219ENST00000622817 MT1EP04732 61 aa2.54□□□□□ -2
CBWD3-219ENST00000622817 MACF1Q9UPN3 7388 aaKnown RBP2.53□□□□□ -2
CBWD3-219ENST00000622817 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
CBWD3-219ENST00000622817 SPRR2FQ96RM1 72 aa2.51□□□□□ -2.01
CBWD3-219ENST00000622817 MT1LQ93083 61 aa2.5□□□□□ -2.01
CBWD3-219ENST00000622817 SYNE2Q8WXH0 6885 aaKnown RBP2.48□□□□□ -2.01
CBWD3-219ENST00000622817 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
CBWD3-219ENST00000622817 LCE3CQ5T5A8 94 aa2.46□□□□□ -2.02
CBWD3-219ENST00000622817 KRTAP19-3Q7Z4W3 81 aa2.45□□□□□ -2.02
CBWD3-219ENST00000622817 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
CBWD3-219ENST00000622817 MT1GP13640 62 aa2.43□□□□□ -2.02
CBWD3-219ENST00000622817 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
CBWD3-219ENST00000622817 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
CBWD3-219ENST00000622817 MT1MQ8N339 61 aa2.39□□□□□ -2.03
CBWD3-219ENST00000622817 SPRR2EP22531 72 aa2.39□□□□□ -2.03
CBWD3-219ENST00000622817 SPRR2BP35325 72 aa2.39□□□□□ -2.03
CBWD3-219ENST00000622817 SPRR2AP35326 72 aa2.39□□□□□ -2.03
CBWD3-219ENST00000622817 LUZP6Q538Z0 58 aa2.37□□□□□ -2.03
CBWD3-219ENST00000622817 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
CBWD3-219ENST00000622817 KRTAP4-3Q9BYR4 195 aa2.33□□□□□ -2.04
CBWD3-219ENST00000622817 SPRR2DP22532 72 aa2.31□□□□□ -2.04
CBWD3-219ENST00000622817 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
CBWD3-219ENST00000622817 NEBP20929 6669 aa2.3□□□□□ -2.04
CBWD3-219ENST00000622817 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
CBWD3-219ENST00000622817 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
CBWD3-219ENST00000622817 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
CBWD3-219ENST00000622817 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
CBWD3-219ENST00000622817 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
CBWD3-219ENST00000622817 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
CBWD3-219ENST00000622817 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
CBWD3-219ENST00000622817 MT1AP04731 61 aa2.12□□□□□ -2.07
CBWD3-219ENST00000622817 KRTAP20-1Q3LI63 56 aa2.12□□□□□ -2.07
CBWD3-219ENST00000622817 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.08
CBWD3-219ENST00000622817 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
CBWD3-219ENST00000622817 MT4P47944 62 aa1.99□□□□□ -2.09
CBWD3-219ENST00000622817 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
CBWD3-219ENST00000622817 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
CBWD3-219ENST00000622817 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
CBWD3-219ENST00000622817 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.1
CBWD3-219ENST00000622817 INE1O15225 51 aa1.89□□□□□ -2.11
CBWD3-219ENST00000622817 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
CBWD3-219ENST00000622817 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
CBWD3-219ENST00000622817 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
CBWD3-219ENST00000622817 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
CBWD3-219ENST00000622817 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
CBWD3-219ENST00000622817 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
CBWD3-219ENST00000622817 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
CBWD3-219ENST00000622817 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
CBWD3-219ENST00000622817 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
CBWD3-219ENST00000622817 PRM1P04553 51 aa1.54□□□□□ -2.16
CBWD3-219ENST00000622817 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
CBWD3-219ENST00000622817 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
CBWD3-219ENST00000622817 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CBWD3-219ENST00000622817 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
CBWD3-219ENST00000622817 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 54.2 ms