RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MUC12Q9UKN1 5478 aa6.45□□□□□ -1.38
PTCHD3-202ENST00000622555 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
PTCHD3-202ENST00000622555 MT1LQ93083 61 aa6.36□□□□□ -1.39
PTCHD3-202ENST00000622555 SPRR2EP22531 72 aa6.36□□□□□ -1.39
PTCHD3-202ENST00000622555 SPRR2BP35325 72 aa6.36□□□□□ -1.39
PTCHD3-202ENST00000622555 SPRR2AP35326 72 aa6.36□□□□□ -1.39
PTCHD3-202ENST00000622555 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
PTCHD3-202ENST00000622555 KRTAP19-3Q7Z4W3 81 aa6.33□□□□□ -1.4
PTCHD3-202ENST00000622555 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
PTCHD3-202ENST00000622555 MT1GP13640 62 aa6.25□□□□□ -1.41
PTCHD3-202ENST00000622555 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
PTCHD3-202ENST00000622555 LUZP6Q538Z0 58 aa6.2□□□□□ -1.42
PTCHD3-202ENST00000622555 NEBP20929 6669 aa6.19□□□□□ -1.42
PTCHD3-202ENST00000622555 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
PTCHD3-202ENST00000622555 MT1MQ8N339 61 aa6.17□□□□□ -1.42
PTCHD3-202ENST00000622555 A0A0A0MQY5 61 aa6.13□□□□□ -1.43
PTCHD3-202ENST00000622555 SPRR2DP22532 72 aa6.13□□□□□ -1.43
PTCHD3-202ENST00000622555 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
PTCHD3-202ENST00000622555 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
PTCHD3-202ENST00000622555 KRTAP4-3Q9BYR4 195 aa6.04□□□□□ -1.44
PTCHD3-202ENST00000622555 LCE3BQ5TA77 95 aa5.9□□□□□ -1.47
PTCHD3-202ENST00000622555 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
PTCHD3-202ENST00000622555 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
PTCHD3-202ENST00000622555 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
PTCHD3-202ENST00000622555 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
PTCHD3-202ENST00000622555 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
PTCHD3-202ENST00000622555 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
PTCHD3-202ENST00000622555 KRTAP2-2Q9BYT5 123 aa5.71□□□□□ -1.5
PTCHD3-202ENST00000622555 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.5
PTCHD3-202ENST00000622555 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
PTCHD3-202ENST00000622555 INE1O15225 51 aa5.54□□□□□ -1.52
PTCHD3-202ENST00000622555 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
PTCHD3-202ENST00000622555 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
PTCHD3-202ENST00000622555 MT1AP04731 61 aa5.41□□□□□ -1.54
PTCHD3-202ENST00000622555 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
PTCHD3-202ENST00000622555 MT4P47944 62 aa5.33□□□□□ -1.56
PTCHD3-202ENST00000622555 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
PTCHD3-202ENST00000622555 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
PTCHD3-202ENST00000622555 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
PTCHD3-202ENST00000622555 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
PTCHD3-202ENST00000622555 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
PTCHD3-202ENST00000622555 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
PTCHD3-202ENST00000622555 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.58
PTCHD3-202ENST00000622555 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
PTCHD3-202ENST00000622555 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
PTCHD3-202ENST00000622555 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
PTCHD3-202ENST00000622555 MT3P25713 68 aa4.92□□□□□ -1.62
PTCHD3-202ENST00000622555 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
PTCHD3-202ENST00000622555 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
PTCHD3-202ENST00000622555 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
PTCHD3-202ENST00000622555 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
PTCHD3-202ENST00000622555 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
PTCHD3-202ENST00000622555 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
PTCHD3-202ENST00000622555 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
PTCHD3-202ENST00000622555 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.69
PTCHD3-202ENST00000622555 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
PTCHD3-202ENST00000622555 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
PTCHD3-202ENST00000622555 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
PTCHD3-202ENST00000622555 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
PTCHD3-202ENST00000622555 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
PTCHD3-202ENST00000622555 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
PTCHD3-202ENST00000622555 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
PTCHD3-202ENST00000622555 PRM1P04553 51 aa4.02□□□□□ -1.77
PTCHD3-202ENST00000622555 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
PTCHD3-202ENST00000622555 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
PTCHD3-202ENST00000622555 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
PTCHD3-202ENST00000622555 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
PTCHD3-202ENST00000622555 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
PTCHD3-202ENST00000622555 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
PTCHD3-202ENST00000622555 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
PTCHD3-202ENST00000622555 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
PTCHD3-202ENST00000622555 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
PTCHD3-202ENST00000622555 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
PTCHD3-202ENST00000622555 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
PTCHD3-202ENST00000622555 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
PTCHD3-202ENST00000622555 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
PTCHD3-202ENST00000622555 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 262.3 ms