RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 MGAM2Q2M2H8 2515 aa0.53□□□□□ -2.32
CPNE3-213ENST00000622183 STAB2Q8WWQ8 2551 aa0.53□□□□□ -2.32
CPNE3-213ENST00000622183 STARD9Q9P2P6 4700 aa0.53□□□□□ -2.32
CPNE3-213ENST00000622183 ASPMQ8IZT6 3477 aa0.52□□□□□ -2.33
CPNE3-213ENST00000622183 LRP1BQ9NZR2 4599 aa0.52□□□□□ -2.33
CPNE3-213ENST00000622183 LAMA2P24043 3122 aaKnown RBP0.52□□□□□ -2.33
CPNE3-213ENST00000622183 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
CPNE3-213ENST00000622183 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
CPNE3-213ENST00000622183 SPRR2FQ96RM1 72 aa0.51□□□□□ -2.33
CPNE3-213ENST00000622183 WDFY3Q8IZQ1 3526 aa0.5□□□□□ -2.33
CPNE3-213ENST00000622183 BRCA2P51587 3418 aa0.5□□□□□ -2.33
CPNE3-213ENST00000622183 PCNTO95613 3336 aa0.5□□□□□ -2.33
CPNE3-213ENST00000622183 HERC1Q15751 4861 aa0.5□□□□□ -2.33
CPNE3-213ENST00000622183 ADGRG4Q8IZF6 3080 aa0.5□□□□□ -2.33
CPNE3-213ENST00000622183 VCANP13611 3396 aa0.49□□□□□ -2.33
CPNE3-213ENST00000622183 SPRR2EP22531 72 aa0.49□□□□□ -2.33
CPNE3-213ENST00000622183 SPTAN1Q13813 2472 aaKnown RBP0.48□□□□□ -2.33
CPNE3-213ENST00000622183 CENPFP49454 3210 aa0.48□□□□□ -2.33
CPNE3-213ENST00000622183 MT1EP04732 61 aa0.48□□□□□ -2.33
CPNE3-213ENST00000622183 MYO9AB2RTY4 2548 aa0.47□□□□□ -2.33
CPNE3-213ENST00000622183 LRP2P98164 4655 aa0.47□□□□□ -2.33
CPNE3-213ENST00000622183 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
CPNE3-213ENST00000622183 MAST4O15021 2626 aa0.47□□□□□ -2.33
CPNE3-213ENST00000622183 EYSQ5T1H1 3165 aa0.47□□□□□ -2.33
CPNE3-213ENST00000622183 SPRR2GQ9BYE4 73 aa0.46□□□□□ -2.34
CPNE3-213ENST00000622183 DNAH14Q0VDD8 3507 aa0.46□□□□□ -2.34
CPNE3-213ENST00000622183 IGSF10Q6WRI0 2623 aa0.46□□□□□ -2.34
CPNE3-213ENST00000622183 HTN3P15516 51 aa0.45□□□□□ -2.34
CPNE3-213ENST00000622183 MT1LQ93083 61 aa0.45□□□□□ -2.34
CPNE3-213ENST00000622183 MT1HP80294 61 aa0.44□□□□□ -2.34
CPNE3-213ENST00000622183 UNC80Q8N2C7 3258 aa0.44□□□□□ -2.34
CPNE3-213ENST00000622183 DEFB4AO15263 64 aa0.43□□□□□ -2.34
CPNE3-213ENST00000622183 DNHD1Q96M86 4753 aa0.42□□□□□ -2.34
CPNE3-213ENST00000622183 KRTAP19-8Q3LI54 63 aa0.4□□□□□ -2.35
CPNE3-213ENST00000622183 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.35
CPNE3-213ENST00000622183 MT1XP80297 61 aa0.38□□□□□ -2.35
CPNE3-213ENST00000622183 HMCN2Q8NDA2 5059 aa0.38□□□□□ -2.35
CPNE3-213ENST00000622183 KRTAP19-2Q3LHN2 52 aa0.37□□□□□ -2.35
CPNE3-213ENST00000622183 KMT2CQ8NEZ4 4911 aaKnown RBP0.36□□□□□ -2.35
CPNE3-213ENST00000622183 KRTAP19-7Q3SYF9 63 aa0.35□□□□□ -2.35
CPNE3-213ENST00000622183 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
CPNE3-213ENST00000622183 CDH23Q9H251 3354 aa0.34□□□□□ -2.35
CPNE3-213ENST00000622183 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
CPNE3-213ENST00000622183 BIRC6Q9NR09 4857 aa0.33□□□□□ -2.36
CPNE3-213ENST00000622183 RYR3Q15413 4870 aa0.32□□□□□ -2.36
CPNE3-213ENST00000622183 SSPOA2VEC9 5147 aa0.32□□□□□ -2.36
CPNE3-213ENST00000622183 HERC2O95714 4834 aa0.31□□□□□ -2.36
CPNE3-213ENST00000622183 USH2AO75445 5202 aa0.31□□□□□ -2.36
CPNE3-213ENST00000622183 MUC2Q02817 5179 aa0.31□□□□□ -2.36
CPNE3-213ENST00000622183 RYR1P21817 5038 aa0.3□□□□□ -2.36
CPNE3-213ENST00000622183 MT1BP07438 61 aa0.3□□□□□ -2.36
CPNE3-213ENST00000622183 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
CPNE3-213ENST00000622183 PCLOQ9Y6V0 5065 aa0.29□□□□□ -2.36
CPNE3-213ENST00000622183 MT2AP02795 61 aa0.28□□□□□ -2.36
CPNE3-213ENST00000622183 MT1MQ8N339 61 aa0.28□□□□□ -2.36
CPNE3-213ENST00000622183 HYDINQ4G0P3 5121 aa0.28□□□□□ -2.37
CPNE3-213ENST00000622183 KMT2DO14686 5537 aa0.27□□□□□ -2.37
CPNE3-213ENST00000622183 KRTAP6-1Q3LI64 71 aa0.27□□□□□ -2.37
CPNE3-213ENST00000622183 MT1GP13640 62 aa0.26□□□□□ -2.37
CPNE3-213ENST00000622183 UBR4Q5T4S7 5183 aa0.25□□□□□ -2.37
CPNE3-213ENST00000622183 MT1HL1P0DM35 61 aa0.21□□□□□ -2.38
CPNE3-213ENST00000622183 MT1FP04733 61 aa0.2□□□□□ -2.38
CPNE3-213ENST00000622183 RNF213Q63HN8 5207 aa0.19□□□□□ -2.38
CPNE3-213ENST00000622183 RYR2Q92736 4967 aa0.16□□□□□ -2.38
CPNE3-213ENST00000622183 GPR98Q8WXG9 6306 aa0.16□□□□□ -2.38
CPNE3-213ENST00000622183 EPPK1P58107 5090 aaKnown RBP0.16□□□□□ -2.38
CPNE3-213ENST00000622183 KIAA1109Q2LD37 5005 aa0.15□□□□□ -2.39
CPNE3-213ENST00000622183 ABCA13Q86UQ4 5058 aa0.12□□□□□ -2.39
CPNE3-213ENST00000622183 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
CPNE3-213ENST00000622183 SYNE2Q8WXH0 6885 aaKnown RBP0.08□□□□□ -2.4
CPNE3-213ENST00000622183 FSIP2Q5CZC0 6907 aa0.04□□□□□ -2.4
CPNE3-213ENST00000622183 MT4P47944 62 aa0.03□□□□□ -2.4
CPNE3-213ENST00000622183 KRTAP19-6Q3LI70 58 aa-0.01□□□□□ -2.41
CPNE3-213ENST00000622183 KRTAP20-2Q3LI61 65 aa-0.03□□□□□ -2.41
CPNE3-213ENST00000622183 DSTQ03001 7570 aaKnown RBP-0.07□□□□□ -2.42
CPNE3-213ENST00000622183 MACF1Q9UPN3 7388 aaKnown RBP-0.1□□□□□ -2.43
CPNE3-213ENST00000622183 KRTAP20-1Q3LI63 56 aa-0.11□□□□□ -2.43
CPNE3-213ENST00000622183 NEBP20929 6669 aa-0.21□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 42.7 ms