RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-219ENST00000622171 PSPHP1O15172 72 aa1.65□□□□□ -2.15
LINC00649-219ENST00000622171 KRTAP4-7Q9BYR0 210 aa1.65□□□□□ -2.15
LINC00649-219ENST00000622171 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
LINC00649-219ENST00000622171 A0A1B0GU69 56 aa1.64□□□□□ -2.15
LINC00649-219ENST00000622171 KRTAP4-3Q9BYR4 195 aa1.64□□□□□ -2.15
LINC00649-219ENST00000622171 LCE3AQ5TA76 89 aa1.63□□□□□ -2.15
LINC00649-219ENST00000622171 LCE5AQ5TCM9 118 aa1.63□□□□□ -2.15
LINC00649-219ENST00000622171 KRTAP19-3Q7Z4W3 81 aa1.63□□□□□ -2.15
LINC00649-219ENST00000622171 PRR15LQ9BU68 103 aa1.63□□□□□ -2.15
LINC00649-219ENST00000622171 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
LINC00649-219ENST00000622171 PMAIP1Q13794 54 aa1.62□□□□□ -2.15
LINC00649-219ENST00000622171 LCE1DQ5T752 114 aa1.62□□□□□ -2.15
LINC00649-219ENST00000622171 A6NED7 52 aa1.61□□□□□ -2.15
LINC00649-219ENST00000622171 KRTAP4-2Q9BYR5 136 aa1.61□□□□□ -2.15
LINC00649-219ENST00000622171 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
LINC00649-219ENST00000622171 MT4P47944 62 aa1.6□□□□□ -2.15
LINC00649-219ENST00000622171 MT1MQ8N339 61 aa1.6□□□□□ -2.15
LINC00649-219ENST00000622171 MT1LQ93083 61 aa1.59□□□□□ -2.15
LINC00649-219ENST00000622171 LINC01558Q9Y6Z2 57 aa1.59□□□□□ -2.15
LINC00649-219ENST00000622171 CDC42SE1Q9NRR8 79 aa1.57□□□□□ -2.16
LINC00649-219ENST00000622171 KTN1-AS1Q86SY8 53 aa1.56□□□□□ -2.16
LINC00649-219ENST00000622171 TNP1P09430 55 aa1.55□□□□□ -2.16
LINC00649-219ENST00000622171 MT1GP13640 62 aa1.55□□□□□ -2.16
LINC00649-219ENST00000622171 PP632Q6XCG6 107 aa1.54□□□□□ -2.16
LINC00649-219ENST00000622171 KRTAP5-3Q6L8H2 238 aa1.53□□□□□ -2.16
LINC00649-219ENST00000622171 KRTAP12-3P60328 96 aa1.52□□□□□ -2.17
LINC00649-219ENST00000622171 MIR22HGQ0VDD5 57 aa1.52□□□□□ -2.17
LINC00649-219ENST00000622171 KRTAP4-11Q9BYQ6 195 aa1.52□□□□□ -2.17
LINC00649-219ENST00000622171 UQCR11O14957 56 aa1.51□□□□□ -2.17
LINC00649-219ENST00000622171 LCE4AQ5TA78 99 aa1.5□□□□□ -2.17
LINC00649-219ENST00000622171 SYNE1Q8NF91 8797 aaKnown RBP1.48□□□□□ -2.17
LINC00649-219ENST00000622171 K7ERS5 55 aa1.47□□□□□ -2.17
LINC00649-219ENST00000622171 KRTAP5-4Q6L8H1 288 aa1.47□□□□□ -2.17
LINC00649-219ENST00000622171 PRAC1Q96KF2 57 aa1.47□□□□□ -2.17
LINC00649-219ENST00000622171 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
LINC00649-219ENST00000622171 KRTAP25-1Q3LHN0 102 aa1.43□□□□□ -2.18
LINC00649-219ENST00000622171 KRTAP20-2Q3LI61 65 aa1.43□□□□□ -2.18
LINC00649-219ENST00000622171 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
LINC00649-219ENST00000622171 KRTAP15-1Q3LI76 137 aa1.41□□□□□ -2.18
LINC00649-219ENST00000622171 SPRR5A0A1B0GTR4 108 aa1.39□□□□□ -2.19
LINC00649-219ENST00000622171 ROMO1P60602 79 aa1.39□□□□□ -2.19
LINC00649-219ENST00000622171 LCE3CQ5T5A8 94 aa1.38□□□□□ -2.19
LINC00649-219ENST00000622171 KRTAP9-6A8MVA2 160 aa1.37□□□□□ -2.19
LINC00649-219ENST00000622171 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
LINC00649-219ENST00000622171 KRTAP6-1Q3LI64 71 aa1.37□□□□□ -2.19
LINC00649-219ENST00000622171 H3BS24 57 aa1.36□□□□□ -2.19
LINC00649-219ENST00000622171 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
LINC00649-219ENST00000622171 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
LINC00649-219ENST00000622171 MT1AP04731 61 aa1.33□□□□□ -2.2
LINC00649-219ENST00000622171 OBSCNQ5VST9 7968 aa1.32□□□□□ -2.2
LINC00649-219ENST00000622171 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
LINC00649-219ENST00000622171 KRTAP6-2Q3LI66 62 aa1.31□□□□□ -2.2
LINC00649-219ENST00000622171 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
LINC00649-219ENST00000622171 KRTAP23-1A1A580 65 aa1.29□□□□□ -2.2
LINC00649-219ENST00000622171 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
LINC00649-219ENST00000622171 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
LINC00649-219ENST00000622171 NDUFAF8A1L188 74 aa1.26□□□□□ -2.21
LINC00649-219ENST00000622171 KRTAP19-4Q3LI73 84 aa1.23□□□□□ -2.21
LINC00649-219ENST00000622171 LUZP6Q538Z0 58 aa1.23□□□□□ -2.21
LINC00649-219ENST00000622171 MT3P25713 68 aa1.19□□□□□ -2.22
LINC00649-219ENST00000622171 A0A0A0MQY5 61 aa1.18□□□□□ -2.22
LINC00649-219ENST00000622171 KRTAP5-1Q6L8H4 278 aa1.17□□□□□ -2.22
LINC00649-219ENST00000622171 LCE1BQ5T7P3 118 aa1.13□□□□□ -2.23
LINC00649-219ENST00000622171 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.08□□□□□ -2.24
LINC00649-219ENST00000622171 INE1O15225 51 aa1.05□□□□□ -2.24
LINC00649-219ENST00000622171 LCE1EQ5T753 118 aa1.05□□□□□ -2.24
LINC00649-219ENST00000622171 KRTAP5-11Q6L8G4 156 aa1.05□□□□□ -2.24
LINC00649-219ENST00000622171 LCE1CQ5T751 118 aa0.99□□□□□ -2.25
LINC00649-219ENST00000622171 LCE3DQ9BYE3 92 aa0.98□□□□□ -2.25
LINC00649-219ENST00000622171 KRTAP4-4Q9BYR3 166 aa0.94□□□□□ -2.26
LINC00649-219ENST00000622171 LCE3EQ5T5B0 92 aa0.92□□□□□ -2.26
LINC00649-219ENST00000622171 LCE1FQ5T754 118 aa0.89□□□□□ -2.27
LINC00649-219ENST00000622171 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
LINC00649-219ENST00000622171 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
LINC00649-219ENST00000622171 MUC19Q7Z5P9 8384 aa0.84□□□□□ -2.28
LINC00649-219ENST00000622171 PRM1P04553 51 aa0.74□□□□□ -2.29
LINC00649-219ENST00000622171 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
LINC00649-219ENST00000622171 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 31.8 ms