RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
CPNE3-212ENST00000621783 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
CPNE3-212ENST00000621783 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
CPNE3-212ENST00000621783 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-212ENST00000621783 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
CPNE3-212ENST00000621783 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
CPNE3-212ENST00000621783 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
CPNE3-212ENST00000621783 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
CPNE3-212ENST00000621783 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.78
CPNE3-212ENST00000621783 KMT2DO14686 5537 aa3.94□□□□□ -1.78
CPNE3-212ENST00000621783 MT1EP04732 61 aa3.91□□□□□ -1.78
CPNE3-212ENST00000621783 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
CPNE3-212ENST00000621783 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
CPNE3-212ENST00000621783 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
CPNE3-212ENST00000621783 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
CPNE3-212ENST00000621783 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
CPNE3-212ENST00000621783 MT3P25713 68 aa3.82□□□□□ -1.8
CPNE3-212ENST00000621783 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
CPNE3-212ENST00000621783 MT1LQ93083 61 aa3.81□□□□□ -1.8
CPNE3-212ENST00000621783 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
CPNE3-212ENST00000621783 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
CPNE3-212ENST00000621783 SPRR2EP22531 72 aa3.73□□□□□ -1.81
CPNE3-212ENST00000621783 SPRR2BP35325 72 aa3.73□□□□□ -1.81
CPNE3-212ENST00000621783 SPRR2AP35326 72 aa3.73□□□□□ -1.81
CPNE3-212ENST00000621783 MT1GP13640 62 aa3.71□□□□□ -1.82
CPNE3-212ENST00000621783 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
CPNE3-212ENST00000621783 MT1MQ8N339 61 aa3.69□□□□□ -1.82
CPNE3-212ENST00000621783 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
CPNE3-212ENST00000621783 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
CPNE3-212ENST00000621783 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
CPNE3-212ENST00000621783 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
CPNE3-212ENST00000621783 SPRR2DP22532 72 aa3.6□□□□□ -1.83
CPNE3-212ENST00000621783 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
CPNE3-212ENST00000621783 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
CPNE3-212ENST00000621783 NEBP20929 6669 aa3.5□□□□□ -1.85
CPNE3-212ENST00000621783 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
CPNE3-212ENST00000621783 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
CPNE3-212ENST00000621783 KRTAP2-3P0C7H8 128 aa3.39□□□□□ -1.87
CPNE3-212ENST00000621783 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
CPNE3-212ENST00000621783 KRTAP2-4Q9BYR9 128 aa3.39□□□□□ -1.87
CPNE3-212ENST00000621783 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
CPNE3-212ENST00000621783 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
CPNE3-212ENST00000621783 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
CPNE3-212ENST00000621783 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
CPNE3-212ENST00000621783 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
CPNE3-212ENST00000621783 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
CPNE3-212ENST00000621783 MT1AP04731 61 aa3.24□□□□□ -1.89
CPNE3-212ENST00000621783 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
CPNE3-212ENST00000621783 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
CPNE3-212ENST00000621783 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
CPNE3-212ENST00000621783 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CPNE3-212ENST00000621783 MT4P47944 62 aa3.12□□□□□ -1.91
CPNE3-212ENST00000621783 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
CPNE3-212ENST00000621783 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
CPNE3-212ENST00000621783 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
CPNE3-212ENST00000621783 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
CPNE3-212ENST00000621783 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
CPNE3-212ENST00000621783 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
CPNE3-212ENST00000621783 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
CPNE3-212ENST00000621783 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
CPNE3-212ENST00000621783 INE1O15225 51 aa2.67□□□□□ -1.98
CPNE3-212ENST00000621783 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
CPNE3-212ENST00000621783 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.98
CPNE3-212ENST00000621783 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
CPNE3-212ENST00000621783 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CPNE3-212ENST00000621783 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
CPNE3-212ENST00000621783 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
CPNE3-212ENST00000621783 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
CPNE3-212ENST00000621783 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
CPNE3-212ENST00000621783 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
CPNE3-212ENST00000621783 PRM1P04553 51 aa2.29□□□□□ -2.04
CPNE3-212ENST00000621783 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
CPNE3-212ENST00000621783 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
CPNE3-212ENST00000621783 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
CPNE3-212ENST00000621783 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
CPNE3-212ENST00000621783 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
CPNE3-212ENST00000621783 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
CPNE3-212ENST00000621783 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 114.5 ms