RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
COL8A1-208ENST00000621757 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
COL8A1-208ENST00000621757 MT1EP04732 61 aa4.48□□□□□ -1.69
COL8A1-208ENST00000621757 TNP1P09430 55 aa4.44□□□□□ -1.7
COL8A1-208ENST00000621757 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
COL8A1-208ENST00000621757 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
COL8A1-208ENST00000621757 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
COL8A1-208ENST00000621757 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
COL8A1-208ENST00000621757 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
COL8A1-208ENST00000621757 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
COL8A1-208ENST00000621757 K7ERS5 55 aa4.32□□□□□ -1.72
COL8A1-208ENST00000621757 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
COL8A1-208ENST00000621757 MT1GP13640 62 aa4.3□□□□□ -1.72
COL8A1-208ENST00000621757 MT1LQ93083 61 aa4.3□□□□□ -1.72
COL8A1-208ENST00000621757 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
COL8A1-208ENST00000621757 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
COL8A1-208ENST00000621757 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
COL8A1-208ENST00000621757 MT1MQ8N339 61 aa4.26□□□□□ -1.73
COL8A1-208ENST00000621757 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
COL8A1-208ENST00000621757 H3BS24 57 aa4.23□□□□□ -1.73
COL8A1-208ENST00000621757 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
COL8A1-208ENST00000621757 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
COL8A1-208ENST00000621757 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
COL8A1-208ENST00000621757 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
COL8A1-208ENST00000621757 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
COL8A1-208ENST00000621757 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
COL8A1-208ENST00000621757 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
COL8A1-208ENST00000621757 MT4P47944 62 aa4.09□□□□□ -1.75
COL8A1-208ENST00000621757 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
COL8A1-208ENST00000621757 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
COL8A1-208ENST00000621757 ROMO1P60602 79 aa4.06□□□□□ -1.76
COL8A1-208ENST00000621757 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
COL8A1-208ENST00000621757 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
COL8A1-208ENST00000621757 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
COL8A1-208ENST00000621757 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
COL8A1-208ENST00000621757 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
COL8A1-208ENST00000621757 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
COL8A1-208ENST00000621757 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
COL8A1-208ENST00000621757 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-208ENST00000621757 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
COL8A1-208ENST00000621757 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
COL8A1-208ENST00000621757 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
COL8A1-208ENST00000621757 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
COL8A1-208ENST00000621757 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
COL8A1-208ENST00000621757 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
COL8A1-208ENST00000621757 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
COL8A1-208ENST00000621757 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
COL8A1-208ENST00000621757 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
COL8A1-208ENST00000621757 MT1AP04731 61 aa3.66□□□□□ -1.82
COL8A1-208ENST00000621757 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
COL8A1-208ENST00000621757 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
COL8A1-208ENST00000621757 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
COL8A1-208ENST00000621757 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
COL8A1-208ENST00000621757 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
COL8A1-208ENST00000621757 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
COL8A1-208ENST00000621757 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
COL8A1-208ENST00000621757 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
COL8A1-208ENST00000621757 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
COL8A1-208ENST00000621757 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
COL8A1-208ENST00000621757 MT3P25713 68 aa3.32□□□□□ -1.88
COL8A1-208ENST00000621757 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
COL8A1-208ENST00000621757 INE1O15225 51 aa3.16□□□□□ -1.9
COL8A1-208ENST00000621757 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
COL8A1-208ENST00000621757 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
COL8A1-208ENST00000621757 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
COL8A1-208ENST00000621757 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
COL8A1-208ENST00000621757 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
COL8A1-208ENST00000621757 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
COL8A1-208ENST00000621757 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
COL8A1-208ENST00000621757 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
COL8A1-208ENST00000621757 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
COL8A1-208ENST00000621757 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
COL8A1-208ENST00000621757 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
COL8A1-208ENST00000621757 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
COL8A1-208ENST00000621757 PRM1P04553 51 aa2.1□□□□□ -2.07
COL8A1-208ENST00000621757 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
COL8A1-208ENST00000621757 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
COL8A1-208ENST00000621757 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 52 ms