RNA–Protein interactions for RNA: ENST00000621499.1

GABRB3-214, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

Gene GABRB3, Length 3,860 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-214ENST00000621499 FSIP2Q5CZC0 6907 aa1.64□□□□□ -2.15
GABRB3-214ENST00000621499 MT3P25713 68 aa1.62□□□□□ -2.15
GABRB3-214ENST00000621499 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.16
GABRB3-214ENST00000621499 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.16
GABRB3-214ENST00000621499 FLGP20930 4061 aaPredicted RBP1.58□□□□□ -2.16
GABRB3-214ENST00000621499 KRTAP8-1Q8IUC2 63 aa1.57□□□□□ -2.16
GABRB3-214ENST00000621499 KRTAP10-7P60409 375 aaPredicted RBP1.57□□□□□ -2.16
GABRB3-214ENST00000621499 MT1BP07438 61 aa1.56□□□□□ -2.16
GABRB3-214ENST00000621499 KRTAP19-8Q3LI54 63 aa1.56□□□□□ -2.16
GABRB3-214ENST00000621499 MT1XP80297 61 aa1.56□□□□□ -2.16
GABRB3-214ENST00000621499 KRTAP10-5P60370 271 aa1.55□□□□□ -2.16
GABRB3-214ENST00000621499 INE1O15225 51 aa1.55□□□□□ -2.16
GABRB3-214ENST00000621499 KRTAP19-5Q3LI72 72 aa1.55□□□□□ -2.16
GABRB3-214ENST00000621499 CRCT1Q9UGL9 99 aa1.54□□□□□ -2.16
GABRB3-214ENST00000621499 LCE3CQ5T5A8 94 aa1.54□□□□□ -2.16
GABRB3-214ENST00000621499 SPRR5A0A1B0GTR4 108 aa1.53□□□□□ -2.16
GABRB3-214ENST00000621499 KRTAP5-9P26371 169 aa1.53□□□□□ -2.16
GABRB3-214ENST00000621499 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
GABRB3-214ENST00000621499 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
GABRB3-214ENST00000621499 LCE1EQ5T753 118 aa1.46□□□□□ -2.18
GABRB3-214ENST00000621499 USH2AO75445 5202 aa1.46□□□□□ -2.18
GABRB3-214ENST00000621499 LCE3EQ5T5B0 92 aa1.43□□□□□ -2.18
GABRB3-214ENST00000621499 KRTAP9-6A8MVA2 160 aa1.41□□□□□ -2.18
GABRB3-214ENST00000621499 SPRR2FQ96RM1 72 aa1.39□□□□□ -2.19
GABRB3-214ENST00000621499 MT1GP13640 62 aa1.39□□□□□ -2.19
GABRB3-214ENST00000621499 SSPOA2VEC9 5147 aa1.38□□□□□ -2.19
GABRB3-214ENST00000621499 MT1LQ93083 61 aa1.37□□□□□ -2.19
GABRB3-214ENST00000621499 KMT2DO14686 5537 aa1.37□□□□□ -2.19
GABRB3-214ENST00000621499 MT1EP04732 61 aa1.37□□□□□ -2.19
GABRB3-214ENST00000621499 OBSCNQ5VST9 7968 aa1.36□□□□□ -2.19
GABRB3-214ENST00000621499 KRTAP19-7Q3SYF9 63 aa1.36□□□□□ -2.19
GABRB3-214ENST00000621499 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
GABRB3-214ENST00000621499 KRTAP4-3Q9BYR4 195 aa1.35□□□□□ -2.19
GABRB3-214ENST00000621499 DSTQ03001 7570 aaKnown RBP1.34□□□□□ -2.2
GABRB3-214ENST00000621499 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
GABRB3-214ENST00000621499 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
GABRB3-214ENST00000621499 SYNE2Q8WXH0 6885 aaKnown RBP1.31□□□□□ -2.2
GABRB3-214ENST00000621499 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
GABRB3-214ENST00000621499 KRTAP19-6Q3LI70 58 aa1.3□□□□□ -2.2
GABRB3-214ENST00000621499 KRTAP5-4Q6L8H1 288 aa1.3□□□□□ -2.2
GABRB3-214ENST00000621499 MT1MQ8N339 61 aa1.3□□□□□ -2.2
GABRB3-214ENST00000621499 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
GABRB3-214ENST00000621499 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
GABRB3-214ENST00000621499 KRTAP2-3P0C7H8 128 aa1.28□□□□□ -2.2
GABRB3-214ENST00000621499 KRTAP2-4Q9BYR9 128 aa1.28□□□□□ -2.2
GABRB3-214ENST00000621499 KRTAP2-1Q9BYU5 128 aa1.28□□□□□ -2.2
GABRB3-214ENST00000621499 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
GABRB3-214ENST00000621499 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
GABRB3-214ENST00000621499 MACF1Q9UPN3 7388 aaKnown RBP1.27□□□□□ -2.21
GABRB3-214ENST00000621499 SPRR2EP22531 72 aa1.26□□□□□ -2.21
GABRB3-214ENST00000621499 SPRR2BP35325 72 aa1.26□□□□□ -2.21
GABRB3-214ENST00000621499 SPRR2AP35326 72 aa1.26□□□□□ -2.21
GABRB3-214ENST00000621499 MUC12Q9UKN1 5478 aa1.25□□□□□ -2.21
GABRB3-214ENST00000621499 KRTAP6-3Q3LI67 103 aa1.24□□□□□ -2.21
GABRB3-214ENST00000621499 KRTAP5-1Q6L8H4 278 aa1.23□□□□□ -2.21
GABRB3-214ENST00000621499 LCE3DQ9BYE3 92 aa1.23□□□□□ -2.21
GABRB3-214ENST00000621499 KRTAP5-5Q701N2 237 aaPredicted RBP1.2□□□□□ -2.22
GABRB3-214ENST00000621499 MDN1Q9NU22 5596 aa1.2□□□□□ -2.22
GABRB3-214ENST00000621499 SPRR2DP22532 72 aa1.2□□□□□ -2.22
GABRB3-214ENST00000621499 NEBP20929 6669 aa1.19□□□□□ -2.22
GABRB3-214ENST00000621499 KRTAP6-1Q3LI64 71 aa1.18□□□□□ -2.22
GABRB3-214ENST00000621499 PRM1P04553 51 aa1.16□□□□□ -2.22
GABRB3-214ENST00000621499 MT1AP04731 61 aa1.16□□□□□ -2.22
GABRB3-214ENST00000621499 KRTAP4-4Q9BYR3 166 aa1.16□□□□□ -2.22
GABRB3-214ENST00000621499 KRTAP20-1Q3LI63 56 aa1.13□□□□□ -2.23
GABRB3-214ENST00000621499 MT4P47944 62 aa1.1□□□□□ -2.23
GABRB3-214ENST00000621499 KRTAP6-2Q3LI66 62 aa1.1□□□□□ -2.23
GABRB3-214ENST00000621499 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
GABRB3-214ENST00000621499 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
GABRB3-214ENST00000621499 LCE1BQ5T7P3 118 aa1.03□□□□□ -2.25
GABRB3-214ENST00000621499 LCE1CQ5T751 118 aa0.99□□□□□ -2.25
GABRB3-214ENST00000621499 KRTAP20-2Q3LI61 65 aa0.92□□□□□ -2.26
GABRB3-214ENST00000621499 MUC19Q7Z5P9 8384 aa0.92□□□□□ -2.26
GABRB3-214ENST00000621499 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
GABRB3-214ENST00000621499 KRTAP21-2Q3LI59 83 aa0.74□□□□□ -2.29
GABRB3-214ENST00000621499 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
GABRB3-214ENST00000621499 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
GABRB3-214ENST00000621499 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 45.2 ms