RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 TNP1P09430 55 aa2.13□□□□□ -2.07
MATR3-228ENST00000620916 C9orf92A6NGG3 77 aa2.12□□□□□ -2.07
MATR3-228ENST00000620916 MT3P25713 68 aa2.12□□□□□ -2.07
MATR3-228ENST00000620916 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
MATR3-228ENST00000620916 KRTAP19-6Q3LI70 58 aa2.09□□□□□ -2.07
MATR3-228ENST00000620916 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
MATR3-228ENST00000620916 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
MATR3-228ENST00000620916 KRTAP10-12P60413 245 aa2.07□□□□□ -2.08
MATR3-228ENST00000620916 USH2AO75445 5202 aa2.07□□□□□ -2.08
MATR3-228ENST00000620916 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
MATR3-228ENST00000620916 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
MATR3-228ENST00000620916 NEBP20929 6669 aa2.03□□□□□ -2.08
MATR3-228ENST00000620916 MT2AP02795 61 aa2.02□□□□□ -2.09
MATR3-228ENST00000620916 MACF1Q9UPN3 7388 aaKnown RBP2.02□□□□□ -2.09
MATR3-228ENST00000620916 KRTAP2-3P0C7H8 128 aa2□□□□□ -2.09
MATR3-228ENST00000620916 KRTAP2-4Q9BYR9 128 aa2□□□□□ -2.09
MATR3-228ENST00000620916 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
MATR3-228ENST00000620916 MT1FP04733 61 aa1.97□□□□□ -2.09
MATR3-228ENST00000620916 KRTAP5-9P26371 169 aa1.96□□□□□ -2.1
MATR3-228ENST00000620916 KRTAP8-1Q8IUC2 63 aa1.95□□□□□ -2.1
MATR3-228ENST00000620916 KRTAP19-8Q3LI54 63 aa1.94□□□□□ -2.1
MATR3-228ENST00000620916 SPRR2GQ9BYE4 73 aa1.93□□□□□ -2.1
MATR3-228ENST00000620916 KRTAP2-1Q9BYU5 128 aa1.92□□□□□ -2.1
MATR3-228ENST00000620916 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
MATR3-228ENST00000620916 LCE3AQ5TA76 89 aa1.89□□□□□ -2.11
MATR3-228ENST00000620916 KRTAP10-5P60370 271 aa1.88□□□□□ -2.11
MATR3-228ENST00000620916 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
MATR3-228ENST00000620916 KRTAP10-7P60409 375 aaPredicted RBP1.83□□□□□ -2.12
MATR3-228ENST00000620916 DSTQ03001 7570 aaKnown RBP1.82□□□□□ -2.12
MATR3-228ENST00000620916 MUC12Q9UKN1 5478 aa1.81□□□□□ -2.12
MATR3-228ENST00000620916 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
MATR3-228ENST00000620916 SPRR2EP22531 72 aa1.8□□□□□ -2.12
MATR3-228ENST00000620916 SPRR2BP35325 72 aa1.8□□□□□ -2.12
MATR3-228ENST00000620916 SPRR2AP35326 72 aa1.8□□□□□ -2.12
MATR3-228ENST00000620916 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
MATR3-228ENST00000620916 KMT2DO14686 5537 aa1.79□□□□□ -2.12
MATR3-228ENST00000620916 KRTAP12-4P60329 112 aa1.78□□□□□ -2.12
MATR3-228ENST00000620916 MT1BP07438 61 aa1.77□□□□□ -2.13
MATR3-228ENST00000620916 LCE1EQ5T753 118 aa1.77□□□□□ -2.13
MATR3-228ENST00000620916 MDN1Q9NU22 5596 aa1.76□□□□□ -2.13
MATR3-228ENST00000620916 SPRR2DP22532 72 aa1.76□□□□□ -2.13
MATR3-228ENST00000620916 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
MATR3-228ENST00000620916 SPRR2FQ96RM1 72 aa1.75□□□□□ -2.13
MATR3-228ENST00000620916 KRTAP5-4Q6L8H1 288 aa1.73□□□□□ -2.13
MATR3-228ENST00000620916 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
MATR3-228ENST00000620916 KRTAP9-6A8MVA2 160 aa1.68□□□□□ -2.14
MATR3-228ENST00000620916 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
MATR3-228ENST00000620916 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
MATR3-228ENST00000620916 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
MATR3-228ENST00000620916 MT1EP04732 61 aa1.63□□□□□ -2.15
MATR3-228ENST00000620916 MT1XP80297 61 aa1.6□□□□□ -2.15
MATR3-228ENST00000620916 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
MATR3-228ENST00000620916 OBSCNQ5VST9 7968 aa1.57□□□□□ -2.16
MATR3-228ENST00000620916 PRM1P04553 51 aa1.55□□□□□ -2.16
MATR3-228ENST00000620916 MT1AP04731 61 aa1.52□□□□□ -2.17
MATR3-228ENST00000620916 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
MATR3-228ENST00000620916 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
MATR3-228ENST00000620916 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
MATR3-228ENST00000620916 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
MATR3-228ENST00000620916 MT1GP13640 62 aa1.49□□□□□ -2.17
MATR3-228ENST00000620916 MT4P47944 62 aa1.49□□□□□ -2.17
MATR3-228ENST00000620916 MT1LQ93083 61 aa1.49□□□□□ -2.17
MATR3-228ENST00000620916 KRTAP19-7Q3SYF9 63 aa1.44□□□□□ -2.18
MATR3-228ENST00000620916 KRTAP4-3Q9BYR4 195 aa1.44□□□□□ -2.18
MATR3-228ENST00000620916 MT1MQ8N339 61 aa1.44□□□□□ -2.18
MATR3-228ENST00000620916 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
MATR3-228ENST00000620916 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
MATR3-228ENST00000620916 MUC5ACP98088 5654 aa1.35□□□□□ -2.19
MATR3-228ENST00000620916 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
MATR3-228ENST00000620916 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
MATR3-228ENST00000620916 KRTAP6-1Q3LI64 71 aa1.15□□□□□ -2.23
MATR3-228ENST00000620916 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
MATR3-228ENST00000620916 LCE1CQ5T751 118 aa1.13□□□□□ -2.23
MATR3-228ENST00000620916 LCE1BQ5T7P3 118 aa1.13□□□□□ -2.23
MATR3-228ENST00000620916 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
MATR3-228ENST00000620916 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
MATR3-228ENST00000620916 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 81.4 ms