RNA–Protein interactions for RNA: ENST00000619874.4

SMIM11B-202, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-202ENST00000619874 TNP1P09430 55 aa5.72□□□□□ -1.49
SMIM11B-202ENST00000619874 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
SMIM11B-202ENST00000619874 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
SMIM11B-202ENST00000619874 MT1XP80297 61 aa5.66□□□□□ -1.5
SMIM11B-202ENST00000619874 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
SMIM11B-202ENST00000619874 SSPOA2VEC9 5147 aa5.62□□□□□ -1.51
SMIM11B-202ENST00000619874 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
SMIM11B-202ENST00000619874 FCGBPQ9Y6R7 5405 aaPredicted RBP5.57□□□□□ -1.52
SMIM11B-202ENST00000619874 USH2AO75445 5202 aa5.55□□□□□ -1.52
SMIM11B-202ENST00000619874 KRTAP5-4Q6L8H1 288 aa5.54□□□□□ -1.52
SMIM11B-202ENST00000619874 KRTAP4-4Q9BYR3 166 aa5.54□□□□□ -1.52
SMIM11B-202ENST00000619874 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
SMIM11B-202ENST00000619874 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
SMIM11B-202ENST00000619874 KRTAP6-3Q3LI67 103 aa5.52□□□□□ -1.53
SMIM11B-202ENST00000619874 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
SMIM11B-202ENST00000619874 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
SMIM11B-202ENST00000619874 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
SMIM11B-202ENST00000619874 LCE1FQ5T754 118 aa5.43□□□□□ -1.54
SMIM11B-202ENST00000619874 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
SMIM11B-202ENST00000619874 NEBP20929 6669 aa5.33□□□□□ -1.56
SMIM11B-202ENST00000619874 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
SMIM11B-202ENST00000619874 KRTAP12-3P60328 96 aa5.21□□□□□ -1.58
SMIM11B-202ENST00000619874 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
SMIM11B-202ENST00000619874 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
SMIM11B-202ENST00000619874 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.59
SMIM11B-202ENST00000619874 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
SMIM11B-202ENST00000619874 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
SMIM11B-202ENST00000619874 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
SMIM11B-202ENST00000619874 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
SMIM11B-202ENST00000619874 KMT2DO14686 5537 aa4.98□□□□□ -1.61
SMIM11B-202ENST00000619874 MT1EP04732 61 aa4.98□□□□□ -1.61
SMIM11B-202ENST00000619874 KRTAP2-1Q9BYU5 128 aa4.96□□□□□ -1.62
SMIM11B-202ENST00000619874 A0A0A0MQY5 61 aa4.95□□□□□ -1.62
SMIM11B-202ENST00000619874 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
SMIM11B-202ENST00000619874 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
SMIM11B-202ENST00000619874 MT1LQ93083 61 aa4.88□□□□□ -1.63
SMIM11B-202ENST00000619874 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
SMIM11B-202ENST00000619874 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
SMIM11B-202ENST00000619874 GPR98Q8WXG9 6306 aa4.87□□□□□ -1.63
SMIM11B-202ENST00000619874 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
SMIM11B-202ENST00000619874 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
SMIM11B-202ENST00000619874 MT1GP13640 62 aa4.78□□□□□ -1.64
SMIM11B-202ENST00000619874 SPRR2EP22531 72 aa4.75□□□□□ -1.65
SMIM11B-202ENST00000619874 SPRR2BP35325 72 aa4.75□□□□□ -1.65
SMIM11B-202ENST00000619874 SPRR2AP35326 72 aa4.75□□□□□ -1.65
SMIM11B-202ENST00000619874 MT1MQ8N339 61 aa4.69□□□□□ -1.66
SMIM11B-202ENST00000619874 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.67
SMIM11B-202ENST00000619874 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
SMIM11B-202ENST00000619874 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
SMIM11B-202ENST00000619874 SPRR2DP22532 72 aa4.61□□□□□ -1.67
SMIM11B-202ENST00000619874 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.7
SMIM11B-202ENST00000619874 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
SMIM11B-202ENST00000619874 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
SMIM11B-202ENST00000619874 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
SMIM11B-202ENST00000619874 MT1AP04731 61 aa4.19□□□□□ -1.74
SMIM11B-202ENST00000619874 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
SMIM11B-202ENST00000619874 MT4P47944 62 aa4.08□□□□□ -1.76
SMIM11B-202ENST00000619874 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
SMIM11B-202ENST00000619874 HMCN1Q96RW7 5635 aa4.07□□□□□ -1.76
SMIM11B-202ENST00000619874 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
SMIM11B-202ENST00000619874 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
SMIM11B-202ENST00000619874 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
SMIM11B-202ENST00000619874 INE1O15225 51 aa3.94□□□□□ -1.78
SMIM11B-202ENST00000619874 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
SMIM11B-202ENST00000619874 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
SMIM11B-202ENST00000619874 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
SMIM11B-202ENST00000619874 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
SMIM11B-202ENST00000619874 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
SMIM11B-202ENST00000619874 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
SMIM11B-202ENST00000619874 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
SMIM11B-202ENST00000619874 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
SMIM11B-202ENST00000619874 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
SMIM11B-202ENST00000619874 PRM1P04553 51 aa3.09□□□□□ -1.91
SMIM11B-202ENST00000619874 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
SMIM11B-202ENST00000619874 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
SMIM11B-202ENST00000619874 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
SMIM11B-202ENST00000619874 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms