RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
TARDBP-221ENST00000619555 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
TARDBP-221ENST00000619555 PRR15LQ9BU68 103 aa4.25□□□□□ -1.73
TARDBP-221ENST00000619555 SMIM26A0A096LP01 95 aa4.23□□□□□ -1.73
TARDBP-221ENST00000619555 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
TARDBP-221ENST00000619555 PCP4P48539 62 aa4.18□□□□□ -1.74
TARDBP-221ENST00000619555 MT1EP04732 61 aa4.17□□□□□ -1.74
TARDBP-221ENST00000619555 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
TARDBP-221ENST00000619555 UQCR11O14957 56 aa4.14□□□□□ -1.75
TARDBP-221ENST00000619555 Q1T7F1 81 aa4.13□□□□□ -1.75
TARDBP-221ENST00000619555 PSPHP1O15172 72 aa4.12□□□□□ -1.75
TARDBP-221ENST00000619555 C10orf95Q9H7T3 257 aa4.12□□□□□ -1.75
TARDBP-221ENST00000619555 V9GYY9 64 aa4.1□□□□□ -1.75
TARDBP-221ENST00000619555 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
TARDBP-221ENST00000619555 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
TARDBP-221ENST00000619555 MT1GP13640 62 aa4.04□□□□□ -1.76
TARDBP-221ENST00000619555 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
TARDBP-221ENST00000619555 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
TARDBP-221ENST00000619555 TNP1P09430 55 aa4□□□□□ -1.77
TARDBP-221ENST00000619555 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
TARDBP-221ENST00000619555 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
TARDBP-221ENST00000619555 MT4P47944 62 aa3.98□□□□□ -1.77
TARDBP-221ENST00000619555 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
TARDBP-221ENST00000619555 MT1MQ8N339 61 aa3.98□□□□□ -1.77
TARDBP-221ENST00000619555 MT1LQ93083 61 aa3.96□□□□□ -1.78
TARDBP-221ENST00000619555 A6NED7 52 aa3.95□□□□□ -1.78
TARDBP-221ENST00000619555 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
TARDBP-221ENST00000619555 K7ERS5 55 aa3.9□□□□□ -1.79
TARDBP-221ENST00000619555 SVIPQ8NHG7 77 aa3.9□□□□□ -1.79
TARDBP-221ENST00000619555 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
TARDBP-221ENST00000619555 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
TARDBP-221ENST00000619555 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
TARDBP-221ENST00000619555 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
TARDBP-221ENST00000619555 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
TARDBP-221ENST00000619555 ROMO1P60602 79 aa3.73□□□□□ -1.81
TARDBP-221ENST00000619555 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
TARDBP-221ENST00000619555 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
TARDBP-221ENST00000619555 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
TARDBP-221ENST00000619555 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
TARDBP-221ENST00000619555 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
TARDBP-221ENST00000619555 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
TARDBP-221ENST00000619555 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
TARDBP-221ENST00000619555 BRK1Q8WUW1 75 aa3.58□□□□□ -1.84
TARDBP-221ENST00000619555 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
TARDBP-221ENST00000619555 MT3P25713 68 aa3.52□□□□□ -1.85
TARDBP-221ENST00000619555 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
TARDBP-221ENST00000619555 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
TARDBP-221ENST00000619555 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
TARDBP-221ENST00000619555 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
TARDBP-221ENST00000619555 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
TARDBP-221ENST00000619555 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
TARDBP-221ENST00000619555 MT1AP04731 61 aa3.36□□□□□ -1.87
TARDBP-221ENST00000619555 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
TARDBP-221ENST00000619555 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
TARDBP-221ENST00000619555 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
TARDBP-221ENST00000619555 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
TARDBP-221ENST00000619555 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
TARDBP-221ENST00000619555 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
TARDBP-221ENST00000619555 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
TARDBP-221ENST00000619555 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
TARDBP-221ENST00000619555 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
TARDBP-221ENST00000619555 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
TARDBP-221ENST00000619555 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
TARDBP-221ENST00000619555 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
TARDBP-221ENST00000619555 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
TARDBP-221ENST00000619555 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
TARDBP-221ENST00000619555 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
TARDBP-221ENST00000619555 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
TARDBP-221ENST00000619555 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
TARDBP-221ENST00000619555 LUZP6Q538Z0 58 aa2.62□□□□□ -1.99
TARDBP-221ENST00000619555 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
TARDBP-221ENST00000619555 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
TARDBP-221ENST00000619555 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
TARDBP-221ENST00000619555 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.09
TARDBP-221ENST00000619555 PRM1P04553 51 aa1.95□□□□□ -2.1
TARDBP-221ENST00000619555 INE1O15225 51 aa1.82□□□□□ -2.12
TARDBP-221ENST00000619555 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
TARDBP-221ENST00000619555 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms