RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 SPRR2EP22531 72 aa6.86□□□□□ -1.31
MALAT1-215ENST00000619449 SPRR2BP35325 72 aa6.86□□□□□ -1.31
MALAT1-215ENST00000619449 SPRR2AP35326 72 aa6.86□□□□□ -1.31
MALAT1-215ENST00000619449 KRTAP19-7Q3SYF9 63 aa6.84□□□□□ -1.31
MALAT1-215ENST00000619449 A6NED7 52 aa6.81□□□□□ -1.32
MALAT1-215ENST00000619449 TNP1P09430 55 aa6.81□□□□□ -1.32
MALAT1-215ENST00000619449 K7ERS5 55 aa6.74□□□□□ -1.33
MALAT1-215ENST00000619449 MT1EP04732 61 aa6.74□□□□□ -1.33
MALAT1-215ENST00000619449 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
MALAT1-215ENST00000619449 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
MALAT1-215ENST00000619449 KRTAP20-1Q3LI63 56 aa6.68□□□□□ -1.34
MALAT1-215ENST00000619449 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
MALAT1-215ENST00000619449 KRTAP2-3P0C7H8 128 aa6.62□□□□□ -1.35
MALAT1-215ENST00000619449 SPRR2DP22532 72 aa6.62□□□□□ -1.35
MALAT1-215ENST00000619449 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
MALAT1-215ENST00000619449 KRTAP2-4Q9BYR9 128 aa6.62□□□□□ -1.35
MALAT1-215ENST00000619449 KRTAP19-3Q7Z4W3 81 aa6.6□□□□□ -1.35
MALAT1-215ENST00000619449 MT1LQ93083 61 aa6.5□□□□□ -1.37
MALAT1-215ENST00000619449 MT1GP13640 62 aa6.48□□□□□ -1.37
MALAT1-215ENST00000619449 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
MALAT1-215ENST00000619449 KRTAP2-2Q9BYT5 123 aa6.43□□□□□ -1.38
MALAT1-215ENST00000619449 KRTAP2-1Q9BYU5 128 aa6.43□□□□□ -1.38
MALAT1-215ENST00000619449 ROMO1P60602 79 aa6.42□□□□□ -1.38
MALAT1-215ENST00000619449 MT1MQ8N339 61 aa6.39□□□□□ -1.39
MALAT1-215ENST00000619449 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
MALAT1-215ENST00000619449 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
MALAT1-215ENST00000619449 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
MALAT1-215ENST00000619449 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
MALAT1-215ENST00000619449 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
MALAT1-215ENST00000619449 KRTAP5-4Q6L8H1 288 aa5.94□□□□□ -1.46
MALAT1-215ENST00000619449 SVIPQ8NHG7 77 aa5.92□□□□□ -1.46
MALAT1-215ENST00000619449 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
MALAT1-215ENST00000619449 PMAIP1Q13794 54 aa5.86□□□□□ -1.47
MALAT1-215ENST00000619449 MT4P47944 62 aa5.76□□□□□ -1.49
MALAT1-215ENST00000619449 HMCN1Q96RW7 5635 aa5.76□□□□□ -1.49
MALAT1-215ENST00000619449 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
MALAT1-215ENST00000619449 KRTAP9-6A8MVA2 160 aa5.7□□□□□ -1.5
MALAT1-215ENST00000619449 KRTAP5-11Q6L8G4 156 aa5.62□□□□□ -1.51
MALAT1-215ENST00000619449 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.62□□□□□ -1.51
MALAT1-215ENST00000619449 PRAC1Q96KF2 57 aa5.6□□□□□ -1.51
MALAT1-215ENST00000619449 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
MALAT1-215ENST00000619449 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
MALAT1-215ENST00000619449 KRTAP20-2Q3LI61 65 aa5.54□□□□□ -1.52
MALAT1-215ENST00000619449 MT1AP04731 61 aa5.53□□□□□ -1.52
MALAT1-215ENST00000619449 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
MALAT1-215ENST00000619449 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
MALAT1-215ENST00000619449 AHNAK2Q8IVF2 5795 aa5.41□□□□□ -1.54
MALAT1-215ENST00000619449 KTN1-AS1Q86SY8 53 aa5.4□□□□□ -1.54
MALAT1-215ENST00000619449 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
MALAT1-215ENST00000619449 GPR98Q8WXG9 6306 aa5.34□□□□□ -1.55
MALAT1-215ENST00000619449 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
MALAT1-215ENST00000619449 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
MALAT1-215ENST00000619449 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
MALAT1-215ENST00000619449 MT3P25713 68 aa5.12□□□□□ -1.59
MALAT1-215ENST00000619449 KRTAP5-7Q6L8G8 165 aa5.02□□□□□ -1.61
MALAT1-215ENST00000619449 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
MALAT1-215ENST00000619449 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
MALAT1-215ENST00000619449 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
MALAT1-215ENST00000619449 LCE1FQ5T754 118 aa4.73□□□□□ -1.65
MALAT1-215ENST00000619449 KRTAP4-4Q9BYR3 166 aa4.68□□□□□ -1.66
MALAT1-215ENST00000619449 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
MALAT1-215ENST00000619449 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
MALAT1-215ENST00000619449 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
MALAT1-215ENST00000619449 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
MALAT1-215ENST00000619449 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
MALAT1-215ENST00000619449 AHNAKQ09666 5890 aaKnown RBP4.3□□□□□ -1.72
MALAT1-215ENST00000619449 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
MALAT1-215ENST00000619449 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
MALAT1-215ENST00000619449 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
MALAT1-215ENST00000619449 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
MALAT1-215ENST00000619449 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
MALAT1-215ENST00000619449 PRM1P04553 51 aa3.31□□□□□ -1.88
MALAT1-215ENST00000619449 INE1O15225 51 aa3.29□□□□□ -1.88
MALAT1-215ENST00000619449 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
MALAT1-215ENST00000619449 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
MALAT1-215ENST00000619449 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
MALAT1-215ENST00000619449 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 7.1 ms