RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 SPRR2BP35325 72 aa8.27□□□□□ -1.09
SGMS1-210ENST00000619438 SPRR2AP35326 72 aa8.27□□□□□ -1.09
SGMS1-210ENST00000619438 SPRR5A0A1B0GTR4 108 aa8.26□□□□□ -1.09
SGMS1-210ENST00000619438 H3BS24 57 aa8.17□□□□□ -1.1
SGMS1-210ENST00000619438 LCE1AQ5T7P2 110 aa8.16□□□□□ -1.1
SGMS1-210ENST00000619438 LUZP6Q538Z0 58 aa8.15□□□□□ -1.1
SGMS1-210ENST00000619438 KRTAP12-3P60328 96 aa8.14□□□□□ -1.11
SGMS1-210ENST00000619438 KRTAP2-3P0C7H8 128 aa8.11□□□□□ -1.11
SGMS1-210ENST00000619438 KRTAP2-4Q9BYR9 128 aa8.11□□□□□ -1.11
SGMS1-210ENST00000619438 SPRR2DP22532 72 aa7.98□□□□□ -1.13
SGMS1-210ENST00000619438 KRTAP19-5Q3LI72 72 aa7.89□□□□□ -1.15
SGMS1-210ENST00000619438 KRTAP2-2Q9BYT5 123 aa7.86□□□□□ -1.15
SGMS1-210ENST00000619438 KRTAP2-1Q9BYU5 128 aa7.86□□□□□ -1.15
SGMS1-210ENST00000619438 KRTAP19-7Q3SYF9 63 aa7.85□□□□□ -1.15
SGMS1-210ENST00000619438 MT1EP04732 61 aa7.78□□□□□ -1.16
SGMS1-210ENST00000619438 LCE3BQ5TA77 95 aa7.77□□□□□ -1.17
SGMS1-210ENST00000619438 KRTAP19-3Q7Z4W3 81 aa7.7□□□□□ -1.18
SGMS1-210ENST00000619438 LCE5AQ5TCM9 118 aa7.67□□□□□ -1.18
SGMS1-210ENST00000619438 LCE3CQ5T5A8 94 aa7.66□□□□□ -1.18
SGMS1-210ENST00000619438 KRTAP19-4Q3LI73 84 aa7.64□□□□□ -1.19
SGMS1-210ENST00000619438 DSTQ03001 7570 aaKnown RBP7.58□□□□□ -1.2
SGMS1-210ENST00000619438 MT1GP13640 62 aa7.56□□□□□ -1.2
SGMS1-210ENST00000619438 MT1LQ93083 61 aa7.47□□□□□ -1.21
SGMS1-210ENST00000619438 A0A0A0MQY5 61 aa7.45□□□□□ -1.22
SGMS1-210ENST00000619438 MT1MQ8N339 61 aa7.4□□□□□ -1.23
SGMS1-210ENST00000619438 KRTAP9-6A8MVA2 160 aa7.26□□□□□ -1.25
SGMS1-210ENST00000619438 KRTAP4-7Q9BYR0 210 aa7.25□□□□□ -1.25
SGMS1-210ENST00000619438 KRTAP4-9Q9BYQ8 210 aa7.25□□□□□ -1.25
SGMS1-210ENST00000619438 KRTAP4-3Q9BYR4 195 aa7.23□□□□□ -1.25
SGMS1-210ENST00000619438 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
SGMS1-210ENST00000619438 LCE4AQ5TA78 99 aa7.04□□□□□ -1.28
SGMS1-210ENST00000619438 MT4P47944 62 aa7.01□□□□□ -1.29
SGMS1-210ENST00000619438 HMCN1Q96RW7 5635 aa6.94□□□□□ -1.3
SGMS1-210ENST00000619438 INE1O15225 51 aa6.93□□□□□ -1.3
SGMS1-210ENST00000619438 KRTAP5-4Q6L8H1 288 aa6.93□□□□□ -1.3
SGMS1-210ENST00000619438 GPR98Q8WXG9 6306 aa6.84□□□□□ -1.31
SGMS1-210ENST00000619438 KRTAP4-6Q9BYQ5 205 aa6.81□□□□□ -1.32
SGMS1-210ENST00000619438 LOC100996750A0A140TA64 210 aa6.78□□□□□ -1.32
SGMS1-210ENST00000619438 KRTAP5-5Q701N2 237 aaPredicted RBP6.72□□□□□ -1.33
SGMS1-210ENST00000619438 KRTAP12-4P60329 112 aa6.61□□□□□ -1.35
SGMS1-210ENST00000619438 AHNAK2Q8IVF2 5795 aa6.6□□□□□ -1.35
SGMS1-210ENST00000619438 KRTAP20-2Q3LI61 65 aa6.55□□□□□ -1.36
SGMS1-210ENST00000619438 KRTAP5-10Q6L8G5 202 aa6.5□□□□□ -1.37
SGMS1-210ENST00000619438 SYNE1Q8NF91 8797 aaKnown RBP6.49□□□□□ -1.37
SGMS1-210ENST00000619438 KRTAP5-3Q6L8H2 238 aa6.37□□□□□ -1.39
SGMS1-210ENST00000619438 MT1AP04731 61 aa6.36□□□□□ -1.39
SGMS1-210ENST00000619438 KRTAP6-1Q3LI64 71 aa6.32□□□□□ -1.4
SGMS1-210ENST00000619438 KRTAP5-7Q6L8G8 165 aa6.22□□□□□ -1.41
SGMS1-210ENST00000619438 KRTAP9-4Q9BYQ2 154 aa6.15□□□□□ -1.42
SGMS1-210ENST00000619438 KRTAP5-2Q701N4 177 aa6.08□□□□□ -1.44
SGMS1-210ENST00000619438 KRTAP6-2Q3LI66 62 aa6.01□□□□□ -1.45
SGMS1-210ENST00000619438 KRTAP4-11Q9BYQ6 195 aa5.96□□□□□ -1.46
SGMS1-210ENST00000619438 OBSCNQ5VST9 7968 aa5.86□□□□□ -1.47
SGMS1-210ENST00000619438 MT3P25713 68 aa5.85□□□□□ -1.47
SGMS1-210ENST00000619438 LCE3DQ9BYE3 92 aa5.82□□□□□ -1.48
SGMS1-210ENST00000619438 KRTAP5-8O75690 187 aa5.76□□□□□ -1.49
SGMS1-210ENST00000619438 LCE3EQ5T5B0 92 aa5.72□□□□□ -1.49
SGMS1-210ENST00000619438 KRTAP5-1Q6L8H4 278 aa5.45□□□□□ -1.54
SGMS1-210ENST00000619438 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
SGMS1-210ENST00000619438 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
SGMS1-210ENST00000619438 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
SGMS1-210ENST00000619438 AHNAKQ09666 5890 aaKnown RBP5.35□□□□□ -1.55
SGMS1-210ENST00000619438 LCE1EQ5T753 118 aa5.29□□□□□ -1.56
SGMS1-210ENST00000619438 PRM1P04553 51 aa5.21□□□□□ -1.58
SGMS1-210ENST00000619438 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
SGMS1-210ENST00000619438 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
SGMS1-210ENST00000619438 LCE1CQ5T751 118 aa4.91□□□□□ -1.62
SGMS1-210ENST00000619438 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
SGMS1-210ENST00000619438 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
SGMS1-210ENST00000619438 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
SGMS1-210ENST00000619438 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
SGMS1-210ENST00000619438 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
SGMS1-210ENST00000619438 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
SGMS1-210ENST00000619438 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
SGMS1-210ENST00000619438 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
SGMS1-210ENST00000619438 KRTAP21-1Q3LI58 79 aa3.32□□□□□ -1.88
SGMS1-210ENST00000619438 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 73.3 ms