RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
SNORD3D-201ENST00000619178 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
SNORD3D-201ENST00000619178 MT1GP13640 62 aa3.95□□□□□ -1.78
SNORD3D-201ENST00000619178 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
SNORD3D-201ENST00000619178 SVIPQ8NHG7 77 aa3.94□□□□□ -1.78
SNORD3D-201ENST00000619178 MT1LQ93083 61 aa3.93□□□□□ -1.78
SNORD3D-201ENST00000619178 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
SNORD3D-201ENST00000619178 SPRR2DP22532 72 aa3.87□□□□□ -1.79
SNORD3D-201ENST00000619178 MT1MQ8N339 61 aa3.82□□□□□ -1.8
SNORD3D-201ENST00000619178 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
SNORD3D-201ENST00000619178 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
SNORD3D-201ENST00000619178 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
SNORD3D-201ENST00000619178 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
SNORD3D-201ENST00000619178 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
SNORD3D-201ENST00000619178 LCE3BQ5TA77 95 aa3.73□□□□□ -1.81
SNORD3D-201ENST00000619178 MDN1Q9NU22 5596 aa3.71□□□□□ -1.81
SNORD3D-201ENST00000619178 NEBP20929 6669 aa3.7□□□□□ -1.82
SNORD3D-201ENST00000619178 KRTAP4-7Q9BYR0 210 aa3.68□□□□□ -1.82
SNORD3D-201ENST00000619178 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
SNORD3D-201ENST00000619178 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
SNORD3D-201ENST00000619178 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
SNORD3D-201ENST00000619178 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
SNORD3D-201ENST00000619178 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
SNORD3D-201ENST00000619178 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
SNORD3D-201ENST00000619178 H3BS24 57 aa3.51□□□□□ -1.85
SNORD3D-201ENST00000619178 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
SNORD3D-201ENST00000619178 LOC100996750A0A140TA64 210 aa3.47□□□□□ -1.85
SNORD3D-201ENST00000619178 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
SNORD3D-201ENST00000619178 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
SNORD3D-201ENST00000619178 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
SNORD3D-201ENST00000619178 MT1AP04731 61 aa3.38□□□□□ -1.87
SNORD3D-201ENST00000619178 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
SNORD3D-201ENST00000619178 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
SNORD3D-201ENST00000619178 MT4P47944 62 aa3.32□□□□□ -1.88
SNORD3D-201ENST00000619178 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
SNORD3D-201ENST00000619178 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
SNORD3D-201ENST00000619178 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
SNORD3D-201ENST00000619178 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
SNORD3D-201ENST00000619178 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
SNORD3D-201ENST00000619178 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
SNORD3D-201ENST00000619178 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
SNORD3D-201ENST00000619178 MT3P25713 68 aa3.11□□□□□ -1.91
SNORD3D-201ENST00000619178 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
SNORD3D-201ENST00000619178 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
SNORD3D-201ENST00000619178 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
SNORD3D-201ENST00000619178 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
SNORD3D-201ENST00000619178 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
SNORD3D-201ENST00000619178 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
SNORD3D-201ENST00000619178 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
SNORD3D-201ENST00000619178 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
SNORD3D-201ENST00000619178 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
SNORD3D-201ENST00000619178 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
SNORD3D-201ENST00000619178 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
SNORD3D-201ENST00000619178 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
SNORD3D-201ENST00000619178 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
SNORD3D-201ENST00000619178 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.97
SNORD3D-201ENST00000619178 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
SNORD3D-201ENST00000619178 INE1O15225 51 aa2.7□□□□□ -1.98
SNORD3D-201ENST00000619178 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
SNORD3D-201ENST00000619178 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
SNORD3D-201ENST00000619178 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
SNORD3D-201ENST00000619178 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
SNORD3D-201ENST00000619178 LCE1CQ5T751 118 aa2.54□□□□□ -2
SNORD3D-201ENST00000619178 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
SNORD3D-201ENST00000619178 MUC5ACP98088 5654 aa2.4□□□□□ -2.02
SNORD3D-201ENST00000619178 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
SNORD3D-201ENST00000619178 PRM1P04553 51 aa2.26□□□□□ -2.05
SNORD3D-201ENST00000619178 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
SNORD3D-201ENST00000619178 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
SNORD3D-201ENST00000619178 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
SNORD3D-201ENST00000619178 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SNORD3D-201ENST00000619178 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
SNORD3D-201ENST00000619178 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
SNORD3D-201ENST00000619178 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
SNORD3D-201ENST00000619178 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
SNORD3D-201ENST00000619178 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
SNORD3D-201ENST00000619178 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 75.2 ms