RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 PLAC4Q8WY50 150 aa1.85□□□□□ -2.11
SEC22B-202ENST00000618538 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.12
SEC22B-202ENST00000618538 MT1HP80294 61 aa1.83□□□□□ -2.12
SEC22B-202ENST00000618538 SPRR2GQ9BYE4 73 aa1.83□□□□□ -2.12
SEC22B-202ENST00000618538 MT1FP04733 61 aa1.82□□□□□ -2.12
SEC22B-202ENST00000618538 KRTAP10-12P60413 245 aa1.82□□□□□ -2.12
SEC22B-202ENST00000618538 PP632Q6XCG6 107 aa1.82□□□□□ -2.12
SEC22B-202ENST00000618538 MT2AP02795 61 aa1.81□□□□□ -2.12
SEC22B-202ENST00000618538 TNP1P09430 55 aa1.79□□□□□ -2.12
SEC22B-202ENST00000618538 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.13
SEC22B-202ENST00000618538 LCE3AQ5TA76 89 aa1.77□□□□□ -2.13
SEC22B-202ENST00000618538 M0R2T5 61 aa1.76□□□□□ -2.13
SEC22B-202ENST00000618538 MT1BP07438 61 aa1.76□□□□□ -2.13
SEC22B-202ENST00000618538 KRTAP10-10P60014 251 aa1.76□□□□□ -2.13
SEC22B-202ENST00000618538 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
SEC22B-202ENST00000618538 MT1XP80297 61 aa1.75□□□□□ -2.13
SEC22B-202ENST00000618538 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
SEC22B-202ENST00000618538 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
SEC22B-202ENST00000618538 KRTAP8-1Q8IUC2 63 aa1.71□□□□□ -2.14
SEC22B-202ENST00000618538 LUZP6Q538Z0 58 aa1.7□□□□□ -2.14
SEC22B-202ENST00000618538 USH2AO75445 5202 aa1.67□□□□□ -2.14
SEC22B-202ENST00000618538 KRTAP12-3P60328 96 aa1.66□□□□□ -2.14
SEC22B-202ENST00000618538 KMT2DO14686 5537 aa1.63□□□□□ -2.15
SEC22B-202ENST00000618538 CRCT1Q9UGL9 99 aa1.62□□□□□ -2.15
SEC22B-202ENST00000618538 KRTAP19-5Q3LI72 72 aa1.62□□□□□ -2.15
SEC22B-202ENST00000618538 KRTAP5-5Q701N2 237 aaPredicted RBP1.6□□□□□ -2.15
SEC22B-202ENST00000618538 LCE1FQ5T754 118 aa1.58□□□□□ -2.16
SEC22B-202ENST00000618538 PRO2289Q9P1D8 64 aa1.58□□□□□ -2.16
SEC22B-202ENST00000618538 FSIP2Q5CZC0 6907 aa1.57□□□□□ -2.16
SEC22B-202ENST00000618538 KRTAP19-7Q3SYF9 63 aa1.56□□□□□ -2.16
SEC22B-202ENST00000618538 LCE3CQ5T5A8 94 aa1.56□□□□□ -2.16
SEC22B-202ENST00000618538 LCE1CQ5T751 118 aa1.55□□□□□ -2.16
SEC22B-202ENST00000618538 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
SEC22B-202ENST00000618538 NEBP20929 6669 aa1.55□□□□□ -2.16
SEC22B-202ENST00000618538 SSPOA2VEC9 5147 aa1.54□□□□□ -2.16
SEC22B-202ENST00000618538 MT1EP04732 61 aa1.5□□□□□ -2.17
SEC22B-202ENST00000618538 MT1LQ93083 61 aa1.5□□□□□ -2.17
SEC22B-202ENST00000618538 INE1O15225 51 aa1.48□□□□□ -2.17
SEC22B-202ENST00000618538 KRTAP2-3P0C7H8 128 aa1.48□□□□□ -2.17
SEC22B-202ENST00000618538 KRTAP2-4Q9BYR9 128 aa1.48□□□□□ -2.17
SEC22B-202ENST00000618538 KRTAP2-1Q9BYU5 128 aa1.48□□□□□ -2.17
SEC22B-202ENST00000618538 KRTAP20-1Q3LI63 56 aa1.47□□□□□ -2.17
SEC22B-202ENST00000618538 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
SEC22B-202ENST00000618538 KRTAP19-6Q3LI70 58 aa1.46□□□□□ -2.18
SEC22B-202ENST00000618538 SYNE2Q8WXH0 6885 aaKnown RBP1.45□□□□□ -2.18
SEC22B-202ENST00000618538 MUC12Q9UKN1 5478 aa1.44□□□□□ -2.18
SEC22B-202ENST00000618538 MT1GP13640 62 aa1.4□□□□□ -2.18
SEC22B-202ENST00000618538 MT1MQ8N339 61 aa1.4□□□□□ -2.18
SEC22B-202ENST00000618538 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
SEC22B-202ENST00000618538 MACF1Q9UPN3 7388 aaKnown RBP1.38□□□□□ -2.19
SEC22B-202ENST00000618538 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
SEC22B-202ENST00000618538 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
SEC22B-202ENST00000618538 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
SEC22B-202ENST00000618538 LCE3EQ5T5B0 92 aa1.34□□□□□ -2.19
SEC22B-202ENST00000618538 SPRR2FQ96RM1 72 aa1.33□□□□□ -2.2
SEC22B-202ENST00000618538 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
SEC22B-202ENST00000618538 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
SEC22B-202ENST00000618538 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
SEC22B-202ENST00000618538 KRTAP12-4P60329 112 aa1.28□□□□□ -2.2
SEC22B-202ENST00000618538 SYNE1Q8NF91 8797 aaKnown RBP1.26□□□□□ -2.21
SEC22B-202ENST00000618538 MT1AP04731 61 aa1.24□□□□□ -2.21
SEC22B-202ENST00000618538 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
SEC22B-202ENST00000618538 SPRR2EP22531 72 aa1.2□□□□□ -2.22
SEC22B-202ENST00000618538 SPRR2BP35325 72 aa1.2□□□□□ -2.22
SEC22B-202ENST00000618538 SPRR2AP35326 72 aa1.2□□□□□ -2.22
SEC22B-202ENST00000618538 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
SEC22B-202ENST00000618538 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
SEC22B-202ENST00000618538 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
SEC22B-202ENST00000618538 PRM1P04553 51 aa1.15□□□□□ -2.23
SEC22B-202ENST00000618538 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
SEC22B-202ENST00000618538 SPRR2DP22532 72 aa1.14□□□□□ -2.23
SEC22B-202ENST00000618538 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
SEC22B-202ENST00000618538 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
SEC22B-202ENST00000618538 MT4P47944 62 aa1.03□□□□□ -2.25
SEC22B-202ENST00000618538 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
SEC22B-202ENST00000618538 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
SEC22B-202ENST00000618538 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
SEC22B-202ENST00000618538 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms