RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
SHANK2-221ENST00000618363 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
SHANK2-221ENST00000618363 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
SHANK2-221ENST00000618363 A8MU10 97 aa4.34□□□□□ -1.71
SHANK2-221ENST00000618363 MT1EP04732 61 aa4.34□□□□□ -1.71
SHANK2-221ENST00000618363 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
SHANK2-221ENST00000618363 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
SHANK2-221ENST00000618363 TNP1P09430 55 aa4.3□□□□□ -1.72
SHANK2-221ENST00000618363 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
SHANK2-221ENST00000618363 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
SHANK2-221ENST00000618363 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
SHANK2-221ENST00000618363 MT1GP13640 62 aa4.25□□□□□ -1.73
SHANK2-221ENST00000618363 MT3P25713 68 aa4.24□□□□□ -1.73
SHANK2-221ENST00000618363 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
SHANK2-221ENST00000618363 TMEM258P61165 79 aa4.23□□□□□ -1.73
SHANK2-221ENST00000618363 UQCR11O14957 56 aa4.21□□□□□ -1.74
SHANK2-221ENST00000618363 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
SHANK2-221ENST00000618363 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
SHANK2-221ENST00000618363 MT1LQ93083 61 aa4.15□□□□□ -1.75
SHANK2-221ENST00000618363 MT1MQ8N339 61 aa4.14□□□□□ -1.75
SHANK2-221ENST00000618363 K7ERS5 55 aa4.12□□□□□ -1.75
SHANK2-221ENST00000618363 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
SHANK2-221ENST00000618363 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
SHANK2-221ENST00000618363 V9GYY9 64 aa4.07□□□□□ -1.76
SHANK2-221ENST00000618363 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
SHANK2-221ENST00000618363 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
SHANK2-221ENST00000618363 MT4P47944 62 aa4.02□□□□□ -1.77
SHANK2-221ENST00000618363 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
SHANK2-221ENST00000618363 PSPHP1O15172 72 aa4□□□□□ -1.77
SHANK2-221ENST00000618363 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
SHANK2-221ENST00000618363 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
SHANK2-221ENST00000618363 Q1T7F1 81 aa3.97□□□□□ -1.77
SHANK2-221ENST00000618363 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
SHANK2-221ENST00000618363 A6NED7 52 aa3.91□□□□□ -1.78
SHANK2-221ENST00000618363 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
SHANK2-221ENST00000618363 CDC42SE1Q9NRR8 79 aa3.84□□□□□ -1.79
SHANK2-221ENST00000618363 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
SHANK2-221ENST00000618363 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
SHANK2-221ENST00000618363 ROMO1P60602 79 aa3.75□□□□□ -1.81
SHANK2-221ENST00000618363 RPS28P62857 69 aaKnown RBP3.75□□□□□ -1.81
SHANK2-221ENST00000618363 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
SHANK2-221ENST00000618363 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
SHANK2-221ENST00000618363 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
SHANK2-221ENST00000618363 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
SHANK2-221ENST00000618363 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
SHANK2-221ENST00000618363 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SHANK2-221ENST00000618363 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
SHANK2-221ENST00000618363 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
SHANK2-221ENST00000618363 MT1AP04731 61 aa3.55□□□□□ -1.84
SHANK2-221ENST00000618363 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
SHANK2-221ENST00000618363 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
SHANK2-221ENST00000618363 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
SHANK2-221ENST00000618363 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
SHANK2-221ENST00000618363 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
SHANK2-221ENST00000618363 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
SHANK2-221ENST00000618363 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
SHANK2-221ENST00000618363 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
SHANK2-221ENST00000618363 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
SHANK2-221ENST00000618363 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
SHANK2-221ENST00000618363 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
SHANK2-221ENST00000618363 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
SHANK2-221ENST00000618363 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
SHANK2-221ENST00000618363 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
SHANK2-221ENST00000618363 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
SHANK2-221ENST00000618363 PRO0628Q9UI54 55 aa2.88□□□□□ -1.95
SHANK2-221ENST00000618363 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
SHANK2-221ENST00000618363 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
SHANK2-221ENST00000618363 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SHANK2-221ENST00000618363 KTN1-AS1Q86SY8 53 aa2.73□□□□□ -1.97
SHANK2-221ENST00000618363 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SHANK2-221ENST00000618363 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
SHANK2-221ENST00000618363 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SHANK2-221ENST00000618363 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
SHANK2-221ENST00000618363 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SHANK2-221ENST00000618363 PRM1P04553 51 aa1.9□□□□□ -2.11
SHANK2-221ENST00000618363 INE1O15225 51 aa1.74□□□□□ -2.13
SHANK2-221ENST00000618363 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
SHANK2-221ENST00000618363 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms