RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 SPRR2AP35326 72 aa8.36□□□□□ -1.07
CBWD3-213ENST00000618217 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
CBWD3-213ENST00000618217 KRTAP23-1A1A580 65 aa8.33□□□□□ -1.08
CBWD3-213ENST00000618217 KRTAP12-3P60328 96 aa8.2□□□□□ -1.1
CBWD3-213ENST00000618217 KRTAP19-3Q7Z4W3 81 aa8.17□□□□□ -1.1
CBWD3-213ENST00000618217 LCE5AQ5TCM9 118 aa8.14□□□□□ -1.11
CBWD3-213ENST00000618217 MT1LQ93083 61 aa8.11□□□□□ -1.11
CBWD3-213ENST00000618217 SPRR2DP22532 72 aa8.07□□□□□ -1.12
CBWD3-213ENST00000618217 MT1GP13640 62 aa8.05□□□□□ -1.12
CBWD3-213ENST00000618217 KRTAP20-1Q3LI63 56 aa7.96□□□□□ -1.14
CBWD3-213ENST00000618217 KRTAP2-3P0C7H8 128 aa7.93□□□□□ -1.14
CBWD3-213ENST00000618217 KRTAP2-4Q9BYR9 128 aa7.93□□□□□ -1.14
CBWD3-213ENST00000618217 MT1MQ8N339 61 aa7.92□□□□□ -1.14
CBWD3-213ENST00000618217 KRTAP15-1Q3LI76 137 aa7.87□□□□□ -1.15
CBWD3-213ENST00000618217 LCE3BQ5TA77 95 aa7.81□□□□□ -1.16
CBWD3-213ENST00000618217 KRTAP19-4Q3LI73 84 aa7.77□□□□□ -1.17
CBWD3-213ENST00000618217 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
CBWD3-213ENST00000618217 KRTAP4-3Q9BYR4 195 aa7.74□□□□□ -1.17
CBWD3-213ENST00000618217 KRTAP2-2Q9BYT5 123 aa7.72□□□□□ -1.17
CBWD3-213ENST00000618217 KRTAP2-1Q9BYU5 128 aa7.72□□□□□ -1.17
CBWD3-213ENST00000618217 DSTQ03001 7570 aaKnown RBP7.67□□□□□ -1.18
CBWD3-213ENST00000618217 LCE3CQ5T5A8 94 aa7.63□□□□□ -1.19
CBWD3-213ENST00000618217 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
CBWD3-213ENST00000618217 KRTAP4-6Q9BYQ5 205 aa7.43□□□□□ -1.22
CBWD3-213ENST00000618217 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
CBWD3-213ENST00000618217 KRTAP5-5Q701N2 237 aaPredicted RBP7.25□□□□□ -1.25
CBWD3-213ENST00000618217 KRTAP9-6A8MVA2 160 aa7.23□□□□□ -1.25
CBWD3-213ENST00000618217 KRTAP5-4Q6L8H1 288 aa7.23□□□□□ -1.25
CBWD3-213ENST00000618217 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
CBWD3-213ENST00000618217 LUZP6Q538Z0 58 aa7.16□□□□□ -1.26
CBWD3-213ENST00000618217 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
CBWD3-213ENST00000618217 LCE1DQ5T752 114 aa7.05□□□□□ -1.28
CBWD3-213ENST00000618217 MT4P47944 62 aa7.01□□□□□ -1.29
CBWD3-213ENST00000618217 NDUFAF8A1L188 74 aa6.98□□□□□ -1.29
CBWD3-213ENST00000618217 MT1AP04731 61 aa6.9□□□□□ -1.31
CBWD3-213ENST00000618217 HMCN1Q96RW7 5635 aa6.89□□□□□ -1.31
CBWD3-213ENST00000618217 KRTAP6-1Q3LI64 71 aa6.84□□□□□ -1.31
CBWD3-213ENST00000618217 KRTAP12-4P60329 112 aa6.83□□□□□ -1.32
CBWD3-213ENST00000618217 KRTAP20-2Q3LI61 65 aa6.76□□□□□ -1.33
CBWD3-213ENST00000618217 SYNE1Q8NF91 8797 aaKnown RBP6.74□□□□□ -1.33
CBWD3-213ENST00000618217 KRTAP9-4Q9BYQ2 154 aa6.62□□□□□ -1.35
CBWD3-213ENST00000618217 KRTAP5-3Q6L8H2 238 aa6.57□□□□□ -1.36
CBWD3-213ENST00000618217 KRTAP5-2Q701N4 177 aa6.44□□□□□ -1.38
CBWD3-213ENST00000618217 KRTAP6-2Q3LI66 62 aa6.4□□□□□ -1.38
CBWD3-213ENST00000618217 AHNAK2Q8IVF2 5795 aa6.4□□□□□ -1.38
CBWD3-213ENST00000618217 GPR98Q8WXG9 6306 aa6.29□□□□□ -1.4
CBWD3-213ENST00000618217 MT3P25713 68 aa6.26□□□□□ -1.41
CBWD3-213ENST00000618217 KRTAP5-10Q6L8G5 202 aa6.25□□□□□ -1.41
CBWD3-213ENST00000618217 KRTAP9-9Q9BYP9 154 aa6.12□□□□□ -1.43
CBWD3-213ENST00000618217 A0A0A0MQY5 61 aa6.1□□□□□ -1.43
CBWD3-213ENST00000618217 H3BS24 57 aa6.04□□□□□ -1.44
CBWD3-213ENST00000618217 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
CBWD3-213ENST00000618217 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
CBWD3-213ENST00000618217 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
CBWD3-213ENST00000618217 OBSCNQ5VST9 7968 aa5.85□□□□□ -1.47
CBWD3-213ENST00000618217 KRTAP5-8O75690 187 aa5.81□□□□□ -1.48
CBWD3-213ENST00000618217 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
CBWD3-213ENST00000618217 INE1O15225 51 aa5.72□□□□□ -1.49
CBWD3-213ENST00000618217 KRTAP5-1Q6L8H4 278 aa5.67□□□□□ -1.5
CBWD3-213ENST00000618217 LCE1EQ5T753 118 aa5.63□□□□□ -1.51
CBWD3-213ENST00000618217 LCE3DQ9BYE3 92 aa5.61□□□□□ -1.51
CBWD3-213ENST00000618217 LCE3EQ5T5B0 92 aa5.42□□□□□ -1.54
CBWD3-213ENST00000618217 MUC5ACP98088 5654 aa5.42□□□□□ -1.54
CBWD3-213ENST00000618217 LCE1CQ5T751 118 aa5.23□□□□□ -1.57
CBWD3-213ENST00000618217 LCE1BQ5T7P3 118 aa5.23□□□□□ -1.57
CBWD3-213ENST00000618217 MUC5BQ9HC84 5762 aaPredicted RBP5.17□□□□□ -1.58
CBWD3-213ENST00000618217 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
CBWD3-213ENST00000618217 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
CBWD3-213ENST00000618217 PRM1P04553 51 aa4.74□□□□□ -1.65
CBWD3-213ENST00000618217 KRTAP5-11Q6L8G4 156 aa4.68□□□□□ -1.66
CBWD3-213ENST00000618217 KRTAP21-2Q3LI59 83 aa4.52□□□□□ -1.69
CBWD3-213ENST00000618217 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
CBWD3-213ENST00000618217 PHGR1C9JFL3 82 aa4.03□□□□□ -1.77
CBWD3-213ENST00000618217 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
CBWD3-213ENST00000618217 MUC19Q7Z5P9 8384 aa3.56□□□□□ -1.84
CBWD3-213ENST00000618217 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
CBWD3-213ENST00000618217 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 36.3 ms