RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
VPS45-213ENST00000618148 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
VPS45-213ENST00000618148 ROMO1P60602 79 aa3.12□□□□□ -1.91
VPS45-213ENST00000618148 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
VPS45-213ENST00000618148 K7ERS5 55 aa3.09□□□□□ -1.91
VPS45-213ENST00000618148 CAMK2N1Q7Z7J9 78 aa3.09□□□□□ -1.91
VPS45-213ENST00000618148 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
VPS45-213ENST00000618148 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
VPS45-213ENST00000618148 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
VPS45-213ENST00000618148 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
VPS45-213ENST00000618148 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
VPS45-213ENST00000618148 KRTAP10-12P60413 245 aa2.98□□□□□ -1.93
VPS45-213ENST00000618148 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
VPS45-213ENST00000618148 TNP1P09430 55 aa2.95□□□□□ -1.94
VPS45-213ENST00000618148 MT3P25713 68 aa2.94□□□□□ -1.94
VPS45-213ENST00000618148 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
VPS45-213ENST00000618148 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
VPS45-213ENST00000618148 KMT2DO14686 5537 aa2.87□□□□□ -1.95
VPS45-213ENST00000618148 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
VPS45-213ENST00000618148 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
VPS45-213ENST00000618148 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
VPS45-213ENST00000618148 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
VPS45-213ENST00000618148 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
VPS45-213ENST00000618148 PP632Q6XCG6 107 aa2.82□□□□□ -1.96
VPS45-213ENST00000618148 KRTAP6-3Q3LI67 103 aa2.81□□□□□ -1.96
VPS45-213ENST00000618148 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
VPS45-213ENST00000618148 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
VPS45-213ENST00000618148 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
VPS45-213ENST00000618148 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
VPS45-213ENST00000618148 MT1EP04732 61 aa2.76□□□□□ -1.97
VPS45-213ENST00000618148 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
VPS45-213ENST00000618148 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
VPS45-213ENST00000618148 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
VPS45-213ENST00000618148 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
VPS45-213ENST00000618148 MT1LQ93083 61 aa2.68□□□□□ -1.98
VPS45-213ENST00000618148 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
VPS45-213ENST00000618148 SPRR2EP22531 72 aa2.64□□□□□ -1.99
VPS45-213ENST00000618148 SPRR2BP35325 72 aa2.64□□□□□ -1.99
VPS45-213ENST00000618148 SPRR2AP35326 72 aa2.64□□□□□ -1.99
VPS45-213ENST00000618148 MT1GP13640 62 aa2.63□□□□□ -1.99
VPS45-213ENST00000618148 NEBP20929 6669 aa2.63□□□□□ -1.99
VPS45-213ENST00000618148 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
VPS45-213ENST00000618148 MT1MQ8N339 61 aa2.6□□□□□ -1.99
VPS45-213ENST00000618148 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
VPS45-213ENST00000618148 SPRR2DP22532 72 aa2.54□□□□□ -2
VPS45-213ENST00000618148 INE1O15225 51 aa2.51□□□□□ -2.01
VPS45-213ENST00000618148 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
VPS45-213ENST00000618148 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
VPS45-213ENST00000618148 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
VPS45-213ENST00000618148 KRTAP2-4Q9BYR9 128 aa2.47□□□□□ -2.01
VPS45-213ENST00000618148 KRTAP20-1Q3LI63 56 aa2.44□□□□□ -2.02
VPS45-213ENST00000618148 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
VPS45-213ENST00000618148 KRTAP2-1Q9BYU5 128 aa2.41□□□□□ -2.02
VPS45-213ENST00000618148 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
VPS45-213ENST00000618148 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
VPS45-213ENST00000618148 MT1AP04731 61 aa2.28□□□□□ -2.04
VPS45-213ENST00000618148 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
VPS45-213ENST00000618148 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
VPS45-213ENST00000618148 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
VPS45-213ENST00000618148 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
VPS45-213ENST00000618148 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
VPS45-213ENST00000618148 MT4P47944 62 aa2.19□□□□□ -2.06
VPS45-213ENST00000618148 SYNE1Q8NF91 8797 aaKnown RBP2.19□□□□□ -2.06
VPS45-213ENST00000618148 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
VPS45-213ENST00000618148 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.08
VPS45-213ENST00000618148 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
VPS45-213ENST00000618148 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
VPS45-213ENST00000618148 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
VPS45-213ENST00000618148 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
VPS45-213ENST00000618148 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
VPS45-213ENST00000618148 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
VPS45-213ENST00000618148 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
VPS45-213ENST00000618148 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
VPS45-213ENST00000618148 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
VPS45-213ENST00000618148 PRM1P04553 51 aa1.52□□□□□ -2.17
VPS45-213ENST00000618148 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
VPS45-213ENST00000618148 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
VPS45-213ENST00000618148 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 168 ms