RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
CPEB1-215ENST00000617958 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
CPEB1-215ENST00000617958 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
CPEB1-215ENST00000617958 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
CPEB1-215ENST00000617958 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
CPEB1-215ENST00000617958 KRTAP9-6A0A140TA67 174 aa3.57□□□□□ -1.84
CPEB1-215ENST00000617958 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
CPEB1-215ENST00000617958 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
CPEB1-215ENST00000617958 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
CPEB1-215ENST00000617958 MT1LQ93083 61 aa3.5□□□□□ -1.85
CPEB1-215ENST00000617958 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
CPEB1-215ENST00000617958 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
CPEB1-215ENST00000617958 MT1EP04732 61 aa3.45□□□□□ -1.86
CPEB1-215ENST00000617958 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
CPEB1-215ENST00000617958 KRTAP9-7A8MTY7 169 aa3.29□□□□□ -1.88
CPEB1-215ENST00000617958 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
CPEB1-215ENST00000617958 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
CPEB1-215ENST00000617958 MT1AP04731 61 aa3.26□□□□□ -1.89
CPEB1-215ENST00000617958 SPRR2EP22531 72 aa3.26□□□□□ -1.89
CPEB1-215ENST00000617958 SPRR2BP35325 72 aa3.26□□□□□ -1.89
CPEB1-215ENST00000617958 SPRR2AP35326 72 aa3.26□□□□□ -1.89
CPEB1-215ENST00000617958 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
CPEB1-215ENST00000617958 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
CPEB1-215ENST00000617958 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
CPEB1-215ENST00000617958 MT1GP13640 62 aa3.23□□□□□ -1.89
CPEB1-215ENST00000617958 MT1MQ8N339 61 aa3.22□□□□□ -1.89
CPEB1-215ENST00000617958 NEBP20929 6669 aa3.22□□□□□ -1.89
CPEB1-215ENST00000617958 LCE5AQ5TCM9 118 aa3.21□□□□□ -1.9
CPEB1-215ENST00000617958 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
CPEB1-215ENST00000617958 PRM1P04553 51 aa3.15□□□□□ -1.91
CPEB1-215ENST00000617958 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
CPEB1-215ENST00000617958 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
CPEB1-215ENST00000617958 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
CPEB1-215ENST00000617958 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
CPEB1-215ENST00000617958 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
CPEB1-215ENST00000617958 SPRR2DP22532 72 aa3.11□□□□□ -1.91
CPEB1-215ENST00000617958 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
CPEB1-215ENST00000617958 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
CPEB1-215ENST00000617958 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
CPEB1-215ENST00000617958 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
CPEB1-215ENST00000617958 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
CPEB1-215ENST00000617958 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
CPEB1-215ENST00000617958 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
CPEB1-215ENST00000617958 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
CPEB1-215ENST00000617958 MT4P47944 62 aa2.83□□□□□ -1.96
CPEB1-215ENST00000617958 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
CPEB1-215ENST00000617958 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
CPEB1-215ENST00000617958 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
CPEB1-215ENST00000617958 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
CPEB1-215ENST00000617958 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
CPEB1-215ENST00000617958 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
CPEB1-215ENST00000617958 MT3P25713 68 aa2.62□□□□□ -1.99
CPEB1-215ENST00000617958 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
CPEB1-215ENST00000617958 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
CPEB1-215ENST00000617958 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
CPEB1-215ENST00000617958 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
CPEB1-215ENST00000617958 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
CPEB1-215ENST00000617958 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
CPEB1-215ENST00000617958 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
CPEB1-215ENST00000617958 KRTAP4-11Q9BYQ6 195 aa2.29□□□□□ -2.04
CPEB1-215ENST00000617958 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
CPEB1-215ENST00000617958 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
CPEB1-215ENST00000617958 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.05
CPEB1-215ENST00000617958 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
CPEB1-215ENST00000617958 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
CPEB1-215ENST00000617958 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
CPEB1-215ENST00000617958 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
CPEB1-215ENST00000617958 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
CPEB1-215ENST00000617958 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
CPEB1-215ENST00000617958 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
CPEB1-215ENST00000617958 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
CPEB1-215ENST00000617958 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
CPEB1-215ENST00000617958 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CPEB1-215ENST00000617958 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.12
CPEB1-215ENST00000617958 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
CPEB1-215ENST00000617958 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
CPEB1-215ENST00000617958 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 110.5 ms