RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 MUC12Q9UKN1 5478 aa6.02□□□□□ -1.45
SNAP47-213ENST00000617596 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
SNAP47-213ENST00000617596 KRTAP12-3P60328 96 aa6□□□□□ -1.45
SNAP47-213ENST00000617596 MT1EP04732 61 aa5.94□□□□□ -1.46
SNAP47-213ENST00000617596 KRTAP5-9P26371 169 aa5.94□□□□□ -1.46
SNAP47-213ENST00000617596 NEBP20929 6669 aa5.94□□□□□ -1.46
SNAP47-213ENST00000617596 MDN1Q9NU22 5596 aa5.87□□□□□ -1.47
SNAP47-213ENST00000617596 MT1LQ93083 61 aa5.8□□□□□ -1.48
SNAP47-213ENST00000617596 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
SNAP47-213ENST00000617596 SPRR2EP22531 72 aa5.74□□□□□ -1.49
SNAP47-213ENST00000617596 SPRR2BP35325 72 aa5.74□□□□□ -1.49
SNAP47-213ENST00000617596 SPRR2AP35326 72 aa5.74□□□□□ -1.49
SNAP47-213ENST00000617596 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
SNAP47-213ENST00000617596 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
SNAP47-213ENST00000617596 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
SNAP47-213ENST00000617596 MT1GP13640 62 aa5.65□□□□□ -1.51
SNAP47-213ENST00000617596 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
SNAP47-213ENST00000617596 MT1MQ8N339 61 aa5.61□□□□□ -1.51
SNAP47-213ENST00000617596 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
SNAP47-213ENST00000617596 KRTAP4-3Q9BYR4 195 aa5.58□□□□□ -1.52
SNAP47-213ENST00000617596 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
SNAP47-213ENST00000617596 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
SNAP47-213ENST00000617596 SPRR2DP22532 72 aa5.53□□□□□ -1.52
SNAP47-213ENST00000617596 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
SNAP47-213ENST00000617596 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
SNAP47-213ENST00000617596 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
SNAP47-213ENST00000617596 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
SNAP47-213ENST00000617596 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
SNAP47-213ENST00000617596 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
SNAP47-213ENST00000617596 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
SNAP47-213ENST00000617596 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
SNAP47-213ENST00000617596 KRTAP5-5Q701N2 237 aaPredicted RBP5.07□□□□□ -1.6
SNAP47-213ENST00000617596 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
SNAP47-213ENST00000617596 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
SNAP47-213ENST00000617596 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
SNAP47-213ENST00000617596 MT1AP04731 61 aa4.89□□□□□ -1.63
SNAP47-213ENST00000617596 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
SNAP47-213ENST00000617596 MT4P47944 62 aa4.85□□□□□ -1.63
SNAP47-213ENST00000617596 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
SNAP47-213ENST00000617596 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
SNAP47-213ENST00000617596 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
SNAP47-213ENST00000617596 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
SNAP47-213ENST00000617596 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
SNAP47-213ENST00000617596 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
SNAP47-213ENST00000617596 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
SNAP47-213ENST00000617596 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
SNAP47-213ENST00000617596 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
SNAP47-213ENST00000617596 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
SNAP47-213ENST00000617596 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
SNAP47-213ENST00000617596 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.69
SNAP47-213ENST00000617596 MT3P25713 68 aa4.44□□□□□ -1.7
SNAP47-213ENST00000617596 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
SNAP47-213ENST00000617596 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
SNAP47-213ENST00000617596 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
SNAP47-213ENST00000617596 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
SNAP47-213ENST00000617596 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
SNAP47-213ENST00000617596 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
SNAP47-213ENST00000617596 PRM1P04553 51 aa4.24□□□□□ -1.73
SNAP47-213ENST00000617596 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
SNAP47-213ENST00000617596 KRTAP5-7Q6L8G8 165 aa4.23□□□□□ -1.73
SNAP47-213ENST00000617596 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
SNAP47-213ENST00000617596 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
SNAP47-213ENST00000617596 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
SNAP47-213ENST00000617596 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
SNAP47-213ENST00000617596 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
SNAP47-213ENST00000617596 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
SNAP47-213ENST00000617596 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
SNAP47-213ENST00000617596 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
SNAP47-213ENST00000617596 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
SNAP47-213ENST00000617596 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
SNAP47-213ENST00000617596 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
SNAP47-213ENST00000617596 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
SNAP47-213ENST00000617596 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
SNAP47-213ENST00000617596 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
SNAP47-213ENST00000617596 PHGR1C9JFL3 82 aa2.78□□□□□ -1.97
SNAP47-213ENST00000617596 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
SNAP47-213ENST00000617596 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 83.3 ms