RNA–Protein interactions for RNA: ENST00000616824.1

FAM220A-206, Transcript of family with sequence similarity 220 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM220A, Length 2,211 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220A-206ENST00000616824 KRTAP9-6A8MVA2 160 aa8.61□□□□□ -1.03
FAM220A-206ENST00000616824 SYNE2Q8WXH0 6885 aaKnown RBP8.55□□□□□ -1.04
FAM220A-206ENST00000616824 MT1EP04732 61 aa8.52□□□□□ -1.05
FAM220A-206ENST00000616824 MUC12Q9UKN1 5478 aa8.52□□□□□ -1.05
FAM220A-206ENST00000616824 KRTAP19-4Q3LI73 84 aa8.48□□□□□ -1.05
FAM220A-206ENST00000616824 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
FAM220A-206ENST00000616824 SPRR2FQ96RM1 72 aa8.37□□□□□ -1.07
FAM220A-206ENST00000616824 MT1LQ93083 61 aa8.37□□□□□ -1.07
FAM220A-206ENST00000616824 KRTAP4-7Q9BYR0 210 aa8.28□□□□□ -1.08
FAM220A-206ENST00000616824 MDN1Q9NU22 5596 aa8.21□□□□□ -1.09
FAM220A-206ENST00000616824 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.2□□□□□ -1.1
FAM220A-206ENST00000616824 KRTAP19-3Q7Z4W3 81 aa8.16□□□□□ -1.1
FAM220A-206ENST00000616824 KRTAP5-9P26371 169 aa8.13□□□□□ -1.11
FAM220A-206ENST00000616824 MT1GP13640 62 aa8.06□□□□□ -1.12
FAM220A-206ENST00000616824 KRTAP4-3Q9BYR4 195 aa8.03□□□□□ -1.12
FAM220A-206ENST00000616824 MT1MQ8N339 61 aa8.02□□□□□ -1.13
FAM220A-206ENST00000616824 LCE5AQ5TCM9 118 aa8.01□□□□□ -1.13
FAM220A-206ENST00000616824 KRTAP6-3Q3LI67 103 aa7.95□□□□□ -1.14
FAM220A-206ENST00000616824 LCE1AQ5T7P2 110 aa7.95□□□□□ -1.14
FAM220A-206ENST00000616824 DSTQ03001 7570 aaKnown RBP7.95□□□□□ -1.14
FAM220A-206ENST00000616824 SPRR2EP22531 72 aa7.9□□□□□ -1.14
FAM220A-206ENST00000616824 SPRR2BP35325 72 aa7.9□□□□□ -1.14
FAM220A-206ENST00000616824 SPRR2AP35326 72 aa7.9□□□□□ -1.14
FAM220A-206ENST00000616824 LOC100996750A0A140TA64 210 aa7.77□□□□□ -1.17
FAM220A-206ENST00000616824 KRTAP12-4P60329 112 aa7.77□□□□□ -1.17
FAM220A-206ENST00000616824 KRTAP9-7A8MTY7 169 aa7.72□□□□□ -1.17
FAM220A-206ENST00000616824 SPRR2DP22532 72 aa7.59□□□□□ -1.19
FAM220A-206ENST00000616824 NEBP20929 6669 aa7.53□□□□□ -1.2
FAM220A-206ENST00000616824 LCE3BQ5TA77 95 aa7.29□□□□□ -1.24
FAM220A-206ENST00000616824 MT1AP04731 61 aa7.25□□□□□ -1.25
FAM220A-206ENST00000616824 KRTAP5-5Q701N2 237 aaPredicted RBP7.19□□□□□ -1.26
FAM220A-206ENST00000616824 KRTAP6-1Q3LI64 71 aa7.1□□□□□ -1.27
FAM220A-206ENST00000616824 SYNE1Q8NF91 8797 aaKnown RBP7.03□□□□□ -1.28
FAM220A-206ENST00000616824 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
FAM220A-206ENST00000616824 LCE3DQ9BYE3 92 aa7.01□□□□□ -1.29
FAM220A-206ENST00000616824 LCE3EQ5T5B0 92 aa7□□□□□ -1.29
FAM220A-206ENST00000616824 PRM1P04553 51 aa6.93□□□□□ -1.3
FAM220A-206ENST00000616824 KRTAP20-1Q3LI63 56 aa6.82□□□□□ -1.32
FAM220A-206ENST00000616824 KRTAP2-2Q9BYT5 123 aa6.82□□□□□ -1.32
FAM220A-206ENST00000616824 KRTAP5-4Q6L8H1 288 aa6.8□□□□□ -1.32
FAM220A-206ENST00000616824 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
FAM220A-206ENST00000616824 MT4P47944 62 aa6.69□□□□□ -1.34
FAM220A-206ENST00000616824 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
FAM220A-206ENST00000616824 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
FAM220A-206ENST00000616824 KRTAP6-2Q3LI66 62 aa6.53□□□□□ -1.36
FAM220A-206ENST00000616824 HMCN1Q96RW7 5635 aa6.53□□□□□ -1.36
FAM220A-206ENST00000616824 LCE1DQ5T752 114 aa6.5□□□□□ -1.37
FAM220A-206ENST00000616824 KRTAP20-2Q3LI61 65 aa6.42□□□□□ -1.38
FAM220A-206ENST00000616824 MT3P25713 68 aa6.4□□□□□ -1.39
FAM220A-206ENST00000616824 OBSCNQ5VST9 7968 aa6.35□□□□□ -1.39
FAM220A-206ENST00000616824 KRTAP5-2Q701N4 177 aa6.17□□□□□ -1.42
FAM220A-206ENST00000616824 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
FAM220A-206ENST00000616824 AHNAK2Q8IVF2 5795 aa5.69□□□□□ -1.5
FAM220A-206ENST00000616824 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
FAM220A-206ENST00000616824 LCE1EQ5T753 118 aa5.54□□□□□ -1.52
FAM220A-206ENST00000616824 KRTAP5-1Q6L8H4 278 aa5.39□□□□□ -1.55
FAM220A-206ENST00000616824 KRTAP5-8O75690 187 aa5.34□□□□□ -1.55
FAM220A-206ENST00000616824 LCE1BQ5T7P3 118 aa5.33□□□□□ -1.56
FAM220A-206ENST00000616824 MUC5ACP98088 5654 aa5.31□□□□□ -1.56
FAM220A-206ENST00000616824 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
FAM220A-206ENST00000616824 KRTAP4-2Q9BYR5 136 aa5.19□□□□□ -1.58
FAM220A-206ENST00000616824 LCE1CQ5T751 118 aa5.13□□□□□ -1.59
FAM220A-206ENST00000616824 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
FAM220A-206ENST00000616824 GPR98Q8WXG9 6306 aa5.07□□□□□ -1.6
FAM220A-206ENST00000616824 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
FAM220A-206ENST00000616824 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
FAM220A-206ENST00000616824 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
FAM220A-206ENST00000616824 KRTAP21-2Q3LI59 83 aa4.62□□□□□ -1.67
FAM220A-206ENST00000616824 KRTAP21-1Q3LI58 79 aa4.52□□□□□ -1.69
FAM220A-206ENST00000616824 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
FAM220A-206ENST00000616824 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
FAM220A-206ENST00000616824 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
FAM220A-206ENST00000616824 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
FAM220A-206ENST00000616824 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
FAM220A-206ENST00000616824 PHGR1C9JFL3 82 aa3.9□□□□□ -1.78
FAM220A-206ENST00000616824 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
FAM220A-206ENST00000616824 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms