RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 FAT4Q6V0I7 4981 aa3.41□□□□□ -1.86
MALAT1-208ENST00000616527 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
MALAT1-208ENST00000616527 KRTAP19-8Q3LI54 63 aa3.41□□□□□ -1.86
MALAT1-208ENST00000616527 C10orf95Q9H7T3 257 aa3.4□□□□□ -1.87
MALAT1-208ENST00000616527 CAMK2N1Q7Z7J9 78 aa3.39□□□□□ -1.87
MALAT1-208ENST00000616527 PLAC4Q8WY50 150 aa3.38□□□□□ -1.87
MALAT1-208ENST00000616527 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
MALAT1-208ENST00000616527 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
MALAT1-208ENST00000616527 MT1BP07438 61 aa3.3□□□□□ -1.88
MALAT1-208ENST00000616527 TNP1P09430 55 aa3.3□□□□□ -1.88
MALAT1-208ENST00000616527 MT1XP80297 61 aa3.21□□□□□ -1.9
MALAT1-208ENST00000616527 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
MALAT1-208ENST00000616527 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
MALAT1-208ENST00000616527 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
MALAT1-208ENST00000616527 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
MALAT1-208ENST00000616527 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
MALAT1-208ENST00000616527 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
MALAT1-208ENST00000616527 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
MALAT1-208ENST00000616527 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
MALAT1-208ENST00000616527 USH2AO75445 5202 aa2.96□□□□□ -1.94
MALAT1-208ENST00000616527 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
MALAT1-208ENST00000616527 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
MALAT1-208ENST00000616527 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
MALAT1-208ENST00000616527 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
MALAT1-208ENST00000616527 SSPOA2VEC9 5147 aa2.88□□□□□ -1.95
MALAT1-208ENST00000616527 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
MALAT1-208ENST00000616527 MT1EP04732 61 aa2.82□□□□□ -1.96
MALAT1-208ENST00000616527 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
MALAT1-208ENST00000616527 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
MALAT1-208ENST00000616527 MT1LQ93083 61 aa2.78□□□□□ -1.96
MALAT1-208ENST00000616527 FSIP2Q5CZC0 6907 aa2.77□□□□□ -1.97
MALAT1-208ENST00000616527 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
MALAT1-208ENST00000616527 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
MALAT1-208ENST00000616527 CRCT1Q9UGL9 99 aa2.72□□□□□ -1.97
MALAT1-208ENST00000616527 MT1GP13640 62 aa2.71□□□□□ -1.98
MALAT1-208ENST00000616527 KRTAP19-3Q7Z4W3 81 aa2.69□□□□□ -1.98
MALAT1-208ENST00000616527 KMT2DO14686 5537 aa2.67□□□□□ -1.98
MALAT1-208ENST00000616527 MT1MQ8N339 61 aa2.64□□□□□ -1.99
MALAT1-208ENST00000616527 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
MALAT1-208ENST00000616527 KRTAP2-3P0C7H8 128 aa2.55□□□□□ -2
MALAT1-208ENST00000616527 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
MALAT1-208ENST00000616527 KRTAP2-4Q9BYR9 128 aa2.55□□□□□ -2
MALAT1-208ENST00000616527 KRTAP2-1Q9BYU5 128 aa2.55□□□□□ -2
MALAT1-208ENST00000616527 MACF1Q9UPN3 7388 aaKnown RBP2.5□□□□□ -2.01
MALAT1-208ENST00000616527 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
MALAT1-208ENST00000616527 MUC12Q9UKN1 5478 aa2.48□□□□□ -2.01
MALAT1-208ENST00000616527 INE1O15225 51 aa2.47□□□□□ -2.01
MALAT1-208ENST00000616527 SPRR2EP22531 72 aa2.46□□□□□ -2.02
MALAT1-208ENST00000616527 SPRR2BP35325 72 aa2.46□□□□□ -2.02
MALAT1-208ENST00000616527 SPRR2AP35326 72 aa2.46□□□□□ -2.02
MALAT1-208ENST00000616527 NEBP20929 6669 aa2.44□□□□□ -2.02
MALAT1-208ENST00000616527 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.03
MALAT1-208ENST00000616527 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
MALAT1-208ENST00000616527 MT1AP04731 61 aa2.38□□□□□ -2.03
MALAT1-208ENST00000616527 SPRR2DP22532 72 aa2.38□□□□□ -2.03
MALAT1-208ENST00000616527 MDN1Q9NU22 5596 aa2.34□□□□□ -2.03
MALAT1-208ENST00000616527 KRTAP20-1Q3LI63 56 aa2.34□□□□□ -2.03
MALAT1-208ENST00000616527 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
MALAT1-208ENST00000616527 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
MALAT1-208ENST00000616527 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
MALAT1-208ENST00000616527 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
MALAT1-208ENST00000616527 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
MALAT1-208ENST00000616527 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
MALAT1-208ENST00000616527 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
MALAT1-208ENST00000616527 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
MALAT1-208ENST00000616527 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
MALAT1-208ENST00000616527 MT4P47944 62 aa2.01□□□□□ -2.09
MALAT1-208ENST00000616527 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
MALAT1-208ENST00000616527 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
MALAT1-208ENST00000616527 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
MALAT1-208ENST00000616527 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
MALAT1-208ENST00000616527 PRM1P04553 51 aa1.83□□□□□ -2.12
MALAT1-208ENST00000616527 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
MALAT1-208ENST00000616527 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
MALAT1-208ENST00000616527 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
MALAT1-208ENST00000616527 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
MALAT1-208ENST00000616527 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 471.4 ms