RNA–Protein interactions for RNA: ENST00000615525.1

NCAM1-223, Transcript of neural cell adhesion molecule 1, human

TSL 5

Gene NCAM1, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-223	ENST00000615525	KRTAP12-3	P60328	96 aa		4.56	□□□□□ -1.68
NCAM1-223	ENST00000615525	SPRR5	A0A1B0GTR4	108 aa		4.53	□□□□□ -1.68
NCAM1-223	ENST00000615525	KRTAP19-6	Q3LI70	58 aa		4.52	□□□□□ -1.69
NCAM1-223	ENST00000615525	NDUFAF8	A1L188	74 aa		4.48	□□□□□ -1.69
NCAM1-223	ENST00000615525	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.43	□□□□□ -1.7
NCAM1-223	ENST00000615525	USH2A	O75445	5202 aa		4.42	□□□□□ -1.7
NCAM1-223	ENST00000615525	KRTAP19-5	Q3LI72	72 aa		4.39	□□□□□ -1.71
NCAM1-223	ENST00000615525	LCE1A	Q5T7P2	110 aa		4.39	□□□□□ -1.71
NCAM1-223	ENST00000615525	SSPO	A2VEC9	5147 aa		4.35	□□□□□ -1.71
NCAM1-223	ENST00000615525	KRTAP19-7	Q3SYF9	63 aa		4.28	□□□□□ -1.72
NCAM1-223	ENST00000615525	KRTAP5-11	Q6L8G4	156 aa		4.28	□□□□□ -1.72
NCAM1-223	ENST00000615525	LCE3C	Q5T5A8	94 aa		4.27	□□□□□ -1.73
NCAM1-223	ENST00000615525	MT1E	P04732	61 aa		4.22	□□□□□ -1.73
NCAM1-223	ENST00000615525	MT1L	Q93083	61 aa		4.17	□□□□□ -1.74
NCAM1-223	ENST00000615525	KRTAP2-2	Q9BYT5	123 aa		4.17	□□□□□ -1.74
NCAM1-223	ENST00000615525		A0A0A0MQY5	61 aa		4.16	□□□□□ -1.74
NCAM1-223	ENST00000615525	MT1G	P13640	62 aa		4.08	□□□□□ -1.76
NCAM1-223	ENST00000615525	KRTAP19-3	Q7Z4W3	81 aa		4.06	□□□□□ -1.76
NCAM1-223	ENST00000615525	CRCT1	Q9UGL9	99 aa		4.05	□□□□□ -1.76
NCAM1-223	ENST00000615525	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.05	□□□□□ -1.76
NCAM1-223	ENST00000615525	FSIP2	Q5CZC0	6907 aa		4.04	□□□□□ -1.76
NCAM1-223	ENST00000615525	KMT2D	O14686	5537 aa		4.04	□□□□□ -1.76
NCAM1-223	ENST00000615525	SPRR2F	Q96RM1	72 aa		3.99	□□□□□ -1.77
NCAM1-223	ENST00000615525	LCE1E	Q5T753	118 aa		3.97	□□□□□ -1.77
NCAM1-223	ENST00000615525	MT1M	Q8N339	61 aa		3.96	□□□□□ -1.78
NCAM1-223	ENST00000615525	KRTAP5-9	P26371	169 aa		3.94	□□□□□ -1.78
NCAM1-223	ENST00000615525	KRTAP9-6	A8MVA2	160 aa		3.92	□□□□□ -1.78
NCAM1-223	ENST00000615525	INE1	O15225	51 aa		3.87	□□□□□ -1.79
NCAM1-223	ENST00000615525	KRTAP2-3	P0C7H8	128 aa		3.84	□□□□□ -1.79
NCAM1-223	ENST00000615525	KRTAP2-4	Q9BYR9	128 aa		3.84	□□□□□ -1.79
NCAM1-223	ENST00000615525	KRTAP2-1	Q9BYU5	128 aa		3.84	□□□□□ -1.79
NCAM1-223	ENST00000615525	MACF1	Q9UPN3	7388 aa	Known RBP	3.83	□□□□□ -1.8
NCAM1-223	ENST00000615525	KRTAP5-1	Q6L8H4	278 aa		3.8	□□□□□ -1.8
NCAM1-223	ENST00000615525	KRTAP6-3	Q3LI67	103 aa		3.78	□□□□□ -1.8
NCAM1-223	ENST00000615525	KRTAP4-3	Q9BYR4	195 aa		3.75	□□□□□ -1.81
NCAM1-223	ENST00000615525	SPRR2E	P22531	72 aa		3.74	□□□□□ -1.81
NCAM1-223	ENST00000615525	SPRR2B	P35325	72 aa		3.74	□□□□□ -1.81
NCAM1-223	ENST00000615525	SPRR2A	P35326	72 aa		3.74	□□□□□ -1.81
NCAM1-223	ENST00000615525	MUC12	Q9UKN1	5478 aa		3.73	□□□□□ -1.81
NCAM1-223	ENST00000615525	KRTAP5-4	Q6L8H1	288 aa		3.71	□□□□□ -1.82
NCAM1-223	ENST00000615525	KRTAP4-4	Q9BYR3	166 aa		3.67	□□□□□ -1.82
NCAM1-223	ENST00000615525	SYNE2	Q8WXH0	6885 aa	Known RBP	3.65	□□□□□ -1.82
NCAM1-223	ENST00000615525	SPRR2D	P22532	72 aa		3.61	□□□□□ -1.83
NCAM1-223	ENST00000615525	MT1A	P04731	61 aa		3.59	□□□□□ -1.83
NCAM1-223	ENST00000615525	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.56	□□□□□ -1.84
NCAM1-223	ENST00000615525	MT3	P25713	68 aa		3.55	□□□□□ -1.84
NCAM1-223	ENST00000615525	MDN1	Q9NU22	5596 aa		3.5	□□□□□ -1.85
NCAM1-223	ENST00000615525	DST	Q03001	7570 aa	Known RBP	3.46	□□□□□ -1.86
NCAM1-223	ENST00000615525	KRTAP6-1	Q3LI64	71 aa		3.46	□□□□□ -1.86
NCAM1-223	ENST00000615525	LCE1F	Q5T754	118 aa		3.42	□□□□□ -1.86
NCAM1-223	ENST00000615525	NEB	P20929	6669 aa		3.36	□□□□□ -1.87
NCAM1-223	ENST00000615525	KRTAP12-4	P60329	112 aa		3.34	□□□□□ -1.87
NCAM1-223	ENST00000615525	SYNE1	Q8NF91	8797 aa	Known RBP	3.29	□□□□□ -1.88
NCAM1-223	ENST00000615525	LCE3D	Q9BYE3	92 aa		3.27	□□□□□ -1.89
NCAM1-223	ENST00000615525	OBSCN	Q5VST9	7968 aa		3.26	□□□□□ -1.89
NCAM1-223	ENST00000615525	LCE3E	Q5T5B0	92 aa		3.22	□□□□□ -1.89
NCAM1-223	ENST00000615525	KRTAP6-2	Q3LI66	62 aa		3.16	□□□□□ -1.9
NCAM1-223	ENST00000615525	KRTAP5-2	Q701N4	177 aa		3.13	□□□□□ -1.91
NCAM1-223	ENST00000615525	KRTAP20-1	Q3LI63	56 aa		3.12	□□□□□ -1.91
NCAM1-223	ENST00000615525	KRTAP20-2	Q3LI61	65 aa		3.08	□□□□□ -1.92
NCAM1-223	ENST00000615525	MT4	P47944	62 aa		3.05	□□□□□ -1.92
NCAM1-223	ENST00000615525	HMCN1	Q96RW7	5635 aa		2.88	□□□□□ -1.95
NCAM1-223	ENST00000615525	PRM1	P04553	51 aa		2.82	□□□□□ -1.96
NCAM1-223	ENST00000615525	KRTAP5-8	O75690	187 aa		2.61	□□□□□ -1.99
NCAM1-223	ENST00000615525	LCE1C	Q5T751	118 aa		2.61	□□□□□ -1.99
NCAM1-223	ENST00000615525	LCE1B	Q5T7P3	118 aa		2.61	□□□□□ -1.99
NCAM1-223	ENST00000615525	KRTAP5-10	Q6L8G5	202 aa		2.61	□□□□□ -1.99
NCAM1-223	ENST00000615525	KRTAP5-7	Q6L8G8	165 aa		2.55	□□□□□ -2
NCAM1-223	ENST00000615525	MUC5AC	P98088	5654 aa		2.49	□□□□□ -2.01
NCAM1-223	ENST00000615525	AHNAK2	Q8IVF2	5795 aa		2.46	□□□□□ -2.02
NCAM1-223	ENST00000615525	KRTAP21-2	Q3LI59	83 aa		2.28	□□□□□ -2.04
NCAM1-223	ENST00000615525	MUC19	Q7Z5P9	8384 aa		2.16	□□□□□ -2.06
NCAM1-223	ENST00000615525	GPR98	Q8WXG9	6306 aa		2.12	□□□□□ -2.07
NCAM1-223	ENST00000615525	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.12	□□□□□ -2.07
NCAM1-223	ENST00000615525	PHGR1	C9JFL3	82 aa		1.93	□□□□□ -2.1
NCAM1-223	ENST00000615525	KRTAP21-1	Q3LI58	79 aa		1.8	□□□□□ -2.12
NCAM1-223	ENST00000615525	AHNAK	Q09666	5890 aa	Known RBP	1.79	□□□□□ -2.12
NCAM1-223	ENST00000615525	MUC16	Q8WXI7	14507 aa		1.24	□□□□□ -2.21

Retrieved 78 of 20,778 RNA–protein pairs in 8.8 ms