RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 KRTAP10-12P60413 245 aa8.65□□□□□ -1.02
CBWD1-223ENST00000613988 KTN1-AS1Q86SY8 53 aa8.57□□□□□ -1.04
CBWD1-223ENST00000613988 KRTAP25-1Q3LHN0 102 aa8.51□□□□□ -1.05
CBWD1-223ENST00000613988 TNP1P09430 55 aa8.49□□□□□ -1.05
CBWD1-223ENST00000613988 LCE3BQ5TA77 95 aa8.48□□□□□ -1.05
CBWD1-223ENST00000613988 PRAC1Q96KF2 57 aa8.33□□□□□ -1.08
CBWD1-223ENST00000613988 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
CBWD1-223ENST00000613988 KRTAP4-12Q9BQ66 201 aa8.27□□□□□ -1.09
CBWD1-223ENST00000613988 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
CBWD1-223ENST00000613988 KRTAP9-9Q9BYP9 154 aa8.18□□□□□ -1.1
CBWD1-223ENST00000613988 KRTAP9-4Q9BYQ2 154 aa8.18□□□□□ -1.1
CBWD1-223ENST00000613988 DSTQ03001 7570 aaKnown RBP8.17□□□□□ -1.1
CBWD1-223ENST00000613988 SVIPQ8NHG7 77 aa8.15□□□□□ -1.1
CBWD1-223ENST00000613988 KRTAP19-7Q3SYF9 63 aa8.14□□□□□ -1.11
CBWD1-223ENST00000613988 LCE5AQ5TCM9 118 aa8.11□□□□□ -1.11
CBWD1-223ENST00000613988 MT1EP04732 61 aa8.09□□□□□ -1.12
CBWD1-223ENST00000613988 LCE3AQ5TA76 89 aa8.09□□□□□ -1.12
CBWD1-223ENST00000613988 KRTAP19-3Q7Z4W3 81 aa8.07□□□□□ -1.12
CBWD1-223ENST00000613988 GPR98Q8WXG9 6306 aa7.97□□□□□ -1.13
CBWD1-223ENST00000613988 KRTAP4-9Q9BYQ8 210 aa7.94□□□□□ -1.14
CBWD1-223ENST00000613988 KRTAP19-5Q3LI72 72 aa7.9□□□□□ -1.14
CBWD1-223ENST00000613988 MT1GP13640 62 aa7.86□□□□□ -1.15
CBWD1-223ENST00000613988 KRTAP4-7Q9BYR0 210 aa7.84□□□□□ -1.15
CBWD1-223ENST00000613988 KRTAP12-3P60328 96 aa7.81□□□□□ -1.16
CBWD1-223ENST00000613988 LCE1DQ5T752 114 aa7.78□□□□□ -1.16
CBWD1-223ENST00000613988 MT1MQ8N339 61 aa7.71□□□□□ -1.17
CBWD1-223ENST00000613988 MT1LQ93083 61 aa7.69□□□□□ -1.18
CBWD1-223ENST00000613988 LCE4AQ5TA78 99 aa7.66□□□□□ -1.18
CBWD1-223ENST00000613988 HMCN1Q96RW7 5635 aa7.65□□□□□ -1.19
CBWD1-223ENST00000613988 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
CBWD1-223ENST00000613988 MT4P47944 62 aa7.62□□□□□ -1.19
CBWD1-223ENST00000613988 KRTAP4-3Q9BYR4 195 aa7.56□□□□□ -1.2
CBWD1-223ENST00000613988 KRTAP4-2Q9BYR5 136 aa7.51□□□□□ -1.21
CBWD1-223ENST00000613988 KRTAP19-4Q3LI73 84 aa7.48□□□□□ -1.21
CBWD1-223ENST00000613988 KRTAP5-4Q6L8H1 288 aa7.46□□□□□ -1.21
CBWD1-223ENST00000613988 AHNAK2Q8IVF2 5795 aa7.43□□□□□ -1.22
CBWD1-223ENST00000613988 LCE3CQ5T5A8 94 aa7.29□□□□□ -1.24
CBWD1-223ENST00000613988 KRTAP4-11Q9BYQ6 195 aa7.28□□□□□ -1.24
CBWD1-223ENST00000613988 KRTAP5-10Q6L8G5 202 aa7.25□□□□□ -1.25
CBWD1-223ENST00000613988 SPRR5A0A1B0GTR4 108 aa7.2□□□□□ -1.26
CBWD1-223ENST00000613988 KRTAP5-5Q701N2 237 aaPredicted RBP7.08□□□□□ -1.28
CBWD1-223ENST00000613988 KRTAP20-2Q3LI61 65 aa7.07□□□□□ -1.28
CBWD1-223ENST00000613988 KRTAP5-3Q6L8H2 238 aa7.06□□□□□ -1.28
CBWD1-223ENST00000613988 KRTAP5-7Q6L8G8 165 aa7□□□□□ -1.29
CBWD1-223ENST00000613988 KRTAP12-4P60329 112 aa6.99□□□□□ -1.29
CBWD1-223ENST00000613988 LUZP6Q538Z0 58 aa6.92□□□□□ -1.3
CBWD1-223ENST00000613988 H3BS24 57 aa6.91□□□□□ -1.3
CBWD1-223ENST00000613988 SYNE1Q8NF91 8797 aaKnown RBP6.91□□□□□ -1.3
CBWD1-223ENST00000613988 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
CBWD1-223ENST00000613988 NDUFAF8A1L188 74 aa6.58□□□□□ -1.36
CBWD1-223ENST00000613988 MT1AP04731 61 aa6.54□□□□□ -1.36
CBWD1-223ENST00000613988 KRTAP6-1Q3LI64 71 aa6.52□□□□□ -1.37
CBWD1-223ENST00000613988 KRTAP5-2Q701N4 177 aa6.5□□□□□ -1.37
CBWD1-223ENST00000613988 KRTAP5-8O75690 187 aa6.29□□□□□ -1.4
CBWD1-223ENST00000613988 KRTAP6-2Q3LI66 62 aa6.28□□□□□ -1.4
CBWD1-223ENST00000613988 OBSCNQ5VST9 7968 aa6.23□□□□□ -1.41
CBWD1-223ENST00000613988 MUC5BQ9HC84 5762 aaPredicted RBP6.18□□□□□ -1.42
CBWD1-223ENST00000613988 AHNAKQ09666 5890 aaKnown RBP6.18□□□□□ -1.42
CBWD1-223ENST00000613988 MUC5ACP98088 5654 aa6.13□□□□□ -1.43
CBWD1-223ENST00000613988 MT3P25713 68 aa6.02□□□□□ -1.45
CBWD1-223ENST00000613988 KRTAP5-1Q6L8H4 278 aa5.87□□□□□ -1.47
CBWD1-223ENST00000613988 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
CBWD1-223ENST00000613988 LCE1EQ5T753 118 aa5.55□□□□□ -1.52
CBWD1-223ENST00000613988 INE1O15225 51 aa5.54□□□□□ -1.52
CBWD1-223ENST00000613988 LCE3DQ9BYE3 92 aa5.45□□□□□ -1.54
CBWD1-223ENST00000613988 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
CBWD1-223ENST00000613988 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
CBWD1-223ENST00000613988 LCE1CQ5T751 118 aa5.16□□□□□ -1.58
CBWD1-223ENST00000613988 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.14□□□□□ -1.59
CBWD1-223ENST00000613988 KRTAP5-11Q6L8G4 156 aa4.91□□□□□ -1.62
CBWD1-223ENST00000613988 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
CBWD1-223ENST00000613988 PRM1P04553 51 aa4.53□□□□□ -1.69
CBWD1-223ENST00000613988 KRTAP21-2Q3LI59 83 aa4.29□□□□□ -1.72
CBWD1-223ENST00000613988 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
CBWD1-223ENST00000613988 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
CBWD1-223ENST00000613988 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
CBWD1-223ENST00000613988 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
CBWD1-223ENST00000613988 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 39.4 ms