RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
TUBD1-216ENST00000613721 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
TUBD1-216ENST00000613721 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.65
TUBD1-216ENST00000613721 KMT2DO14686 5537 aa4.69□□□□□ -1.66
TUBD1-216ENST00000613721 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
TUBD1-216ENST00000613721 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
TUBD1-216ENST00000613721 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
TUBD1-216ENST00000613721 INE1O15225 51 aa4.55□□□□□ -1.68
TUBD1-216ENST00000613721 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
TUBD1-216ENST00000613721 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
TUBD1-216ENST00000613721 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
TUBD1-216ENST00000613721 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
TUBD1-216ENST00000613721 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
TUBD1-216ENST00000613721 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
TUBD1-216ENST00000613721 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
TUBD1-216ENST00000613721 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
TUBD1-216ENST00000613721 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
TUBD1-216ENST00000613721 MT1EP04732 61 aa4.19□□□□□ -1.74
TUBD1-216ENST00000613721 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
TUBD1-216ENST00000613721 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
TUBD1-216ENST00000613721 MT1LQ93083 61 aa4.17□□□□□ -1.74
TUBD1-216ENST00000613721 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
TUBD1-216ENST00000613721 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
TUBD1-216ENST00000613721 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
TUBD1-216ENST00000613721 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
TUBD1-216ENST00000613721 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
TUBD1-216ENST00000613721 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
TUBD1-216ENST00000613721 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
TUBD1-216ENST00000613721 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
TUBD1-216ENST00000613721 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
TUBD1-216ENST00000613721 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
TUBD1-216ENST00000613721 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
TUBD1-216ENST00000613721 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
TUBD1-216ENST00000613721 MT1GP13640 62 aa3.92□□□□□ -1.78
TUBD1-216ENST00000613721 MT1MQ8N339 61 aa3.92□□□□□ -1.78
TUBD1-216ENST00000613721 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
TUBD1-216ENST00000613721 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
TUBD1-216ENST00000613721 SPRR2EP22531 72 aa3.73□□□□□ -1.81
TUBD1-216ENST00000613721 SPRR2BP35325 72 aa3.73□□□□□ -1.81
TUBD1-216ENST00000613721 SPRR2AP35326 72 aa3.73□□□□□ -1.81
TUBD1-216ENST00000613721 NEBP20929 6669 aa3.7□□□□□ -1.82
TUBD1-216ENST00000613721 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
TUBD1-216ENST00000613721 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
TUBD1-216ENST00000613721 SPRR2DP22532 72 aa3.57□□□□□ -1.84
TUBD1-216ENST00000613721 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
TUBD1-216ENST00000613721 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
TUBD1-216ENST00000613721 MT3P25713 68 aa3.53□□□□□ -1.84
TUBD1-216ENST00000613721 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
TUBD1-216ENST00000613721 MT1AP04731 61 aa3.52□□□□□ -1.85
TUBD1-216ENST00000613721 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
TUBD1-216ENST00000613721 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
TUBD1-216ENST00000613721 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
TUBD1-216ENST00000613721 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
TUBD1-216ENST00000613721 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
TUBD1-216ENST00000613721 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
TUBD1-216ENST00000613721 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
TUBD1-216ENST00000613721 MT4P47944 62 aa3.2□□□□□ -1.9
TUBD1-216ENST00000613721 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
TUBD1-216ENST00000613721 PRM1P04553 51 aa3.11□□□□□ -1.91
TUBD1-216ENST00000613721 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
TUBD1-216ENST00000613721 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
TUBD1-216ENST00000613721 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
TUBD1-216ENST00000613721 LCE1FQ5T754 118 aa3□□□□□ -1.93
TUBD1-216ENST00000613721 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
TUBD1-216ENST00000613721 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
TUBD1-216ENST00000613721 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
TUBD1-216ENST00000613721 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
TUBD1-216ENST00000613721 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
TUBD1-216ENST00000613721 KRTAP5-8O75690 187 aa2.57□□□□□ -2
TUBD1-216ENST00000613721 LCE1CQ5T751 118 aa2.55□□□□□ -2
TUBD1-216ENST00000613721 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2.01
TUBD1-216ENST00000613721 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
TUBD1-216ENST00000613721 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
TUBD1-216ENST00000613721 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
TUBD1-216ENST00000613721 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
TUBD1-216ENST00000613721 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
TUBD1-216ENST00000613721 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 72.5 ms