RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 NEBP20929 6669 aa2.78□□□□□ -1.97
PPARGC1A-217ENST00000613098 KRTAP4-8A0A0G2JLE6 195 aa2.77□□□□□ -1.97
PPARGC1A-217ENST00000613098 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
PPARGC1A-217ENST00000613098 KRTAP4-7Q9BYR0 210 aa2.76□□□□□ -1.97
PPARGC1A-217ENST00000613098 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
PPARGC1A-217ENST00000613098 INE1O15225 51 aa2.72□□□□□ -1.97
PPARGC1A-217ENST00000613098 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
PPARGC1A-217ENST00000613098 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
PPARGC1A-217ENST00000613098 LCE3BQ5TA77 95 aa2.68□□□□□ -1.98
PPARGC1A-217ENST00000613098 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
PPARGC1A-217ENST00000613098 KRTAP2-2Q9BYT5 123 aa2.66□□□□□ -1.98
PPARGC1A-217ENST00000613098 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
PPARGC1A-217ENST00000613098 KRTAP19-4Q3LI73 84 aa2.64□□□□□ -1.99
PPARGC1A-217ENST00000613098 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
PPARGC1A-217ENST00000613098 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
PPARGC1A-217ENST00000613098 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
PPARGC1A-217ENST00000613098 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
PPARGC1A-217ENST00000613098 KRTAP9-4Q9BYQ2 154 aa2.57□□□□□ -2
PPARGC1A-217ENST00000613098 MT1LQ93083 61 aa2.56□□□□□ -2
PPARGC1A-217ENST00000613098 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
PPARGC1A-217ENST00000613098 MT1EP04732 61 aa2.55□□□□□ -2
PPARGC1A-217ENST00000613098 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
PPARGC1A-217ENST00000613098 KRTAP4-9Q9BYQ8 210 aa2.5□□□□□ -2.01
PPARGC1A-217ENST00000613098 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
PPARGC1A-217ENST00000613098 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
PPARGC1A-217ENST00000613098 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
PPARGC1A-217ENST00000613098 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
PPARGC1A-217ENST00000613098 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
PPARGC1A-217ENST00000613098 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.02
PPARGC1A-217ENST00000613098 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.02
PPARGC1A-217ENST00000613098 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
PPARGC1A-217ENST00000613098 MT1GP13640 62 aa2.38□□□□□ -2.03
PPARGC1A-217ENST00000613098 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
PPARGC1A-217ENST00000613098 LCE5AQ5TCM9 118 aa2.36□□□□□ -2.03
PPARGC1A-217ENST00000613098 MT1MQ8N339 61 aa2.36□□□□□ -2.03
PPARGC1A-217ENST00000613098 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
PPARGC1A-217ENST00000613098 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
PPARGC1A-217ENST00000613098 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
PPARGC1A-217ENST00000613098 KRTAP12-4P60329 112 aa2.28□□□□□ -2.04
PPARGC1A-217ENST00000613098 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
PPARGC1A-217ENST00000613098 SYNE2Q8WXH0 6885 aaKnown RBP2.26□□□□□ -2.05
PPARGC1A-217ENST00000613098 SPRR2EP22531 72 aa2.25□□□□□ -2.05
PPARGC1A-217ENST00000613098 SPRR2BP35325 72 aa2.25□□□□□ -2.05
PPARGC1A-217ENST00000613098 SPRR2AP35326 72 aa2.25□□□□□ -2.05
PPARGC1A-217ENST00000613098 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
PPARGC1A-217ENST00000613098 SPRR2DP22532 72 aa2.22□□□□□ -2.05
PPARGC1A-217ENST00000613098 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.06
PPARGC1A-217ENST00000613098 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
PPARGC1A-217ENST00000613098 KRTAP6-1Q3LI64 71 aa2.19□□□□□ -2.06
PPARGC1A-217ENST00000613098 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
PPARGC1A-217ENST00000613098 MT1AP04731 61 aa2.17□□□□□ -2.06
PPARGC1A-217ENST00000613098 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
PPARGC1A-217ENST00000613098 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
PPARGC1A-217ENST00000613098 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.06
PPARGC1A-217ENST00000613098 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
PPARGC1A-217ENST00000613098 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
PPARGC1A-217ENST00000613098 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
PPARGC1A-217ENST00000613098 PRM1P04553 51 aa2.03□□□□□ -2.08
PPARGC1A-217ENST00000613098 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
PPARGC1A-217ENST00000613098 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
PPARGC1A-217ENST00000613098 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
PPARGC1A-217ENST00000613098 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
PPARGC1A-217ENST00000613098 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
PPARGC1A-217ENST00000613098 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
PPARGC1A-217ENST00000613098 MT3P25713 68 aa1.85□□□□□ -2.11
PPARGC1A-217ENST00000613098 LCE1FQ5T754 118 aa1.84□□□□□ -2.12
PPARGC1A-217ENST00000613098 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
PPARGC1A-217ENST00000613098 MT4P47944 62 aa1.71□□□□□ -2.14
PPARGC1A-217ENST00000613098 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
PPARGC1A-217ENST00000613098 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
PPARGC1A-217ENST00000613098 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
PPARGC1A-217ENST00000613098 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
PPARGC1A-217ENST00000613098 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
PPARGC1A-217ENST00000613098 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
PPARGC1A-217ENST00000613098 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
PPARGC1A-217ENST00000613098 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
PPARGC1A-217ENST00000613098 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 77.5 ms