RNA–Protein interactions for RNA: ENST00000612991.4

RELA-226, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 1 (best) BASIC

Gene RELA, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-226ENST00000612991 MT1EP04732 61 aa6.45□□□□□ -1.38
RELA-226ENST00000612991 SPRR2FQ96RM1 72 aa6.43□□□□□ -1.38
RELA-226ENST00000612991 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
RELA-226ENST00000612991 MT1LQ93083 61 aa6.35□□□□□ -1.39
RELA-226ENST00000612991 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
RELA-226ENST00000612991 MDN1Q9NU22 5596 aa6.29□□□□□ -1.4
RELA-226ENST00000612991 KRTAP9-6A8MVA2 160 aa6.26□□□□□ -1.41
RELA-226ENST00000612991 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
RELA-226ENST00000612991 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
RELA-226ENST00000612991 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
RELA-226ENST00000612991 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
RELA-226ENST00000612991 MT1GP13640 62 aa6.12□□□□□ -1.43
RELA-226ENST00000612991 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
RELA-226ENST00000612991 SPRR2EP22531 72 aa6.1□□□□□ -1.43
RELA-226ENST00000612991 SPRR2BP35325 72 aa6.1□□□□□ -1.43
RELA-226ENST00000612991 SPRR2AP35326 72 aa6.1□□□□□ -1.43
RELA-226ENST00000612991 KRTAP4-3Q9BYR4 195 aa6.1□□□□□ -1.43
RELA-226ENST00000612991 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
RELA-226ENST00000612991 MT1MQ8N339 61 aa6.09□□□□□ -1.44
RELA-226ENST00000612991 DSTQ03001 7570 aaKnown RBP6.01□□□□□ -1.45
RELA-226ENST00000612991 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
RELA-226ENST00000612991 NEBP20929 6669 aa5.89□□□□□ -1.47
RELA-226ENST00000612991 SPRR2DP22532 72 aa5.87□□□□□ -1.47
RELA-226ENST00000612991 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
RELA-226ENST00000612991 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
RELA-226ENST00000612991 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
RELA-226ENST00000612991 LCE3BQ5TA77 95 aa5.65□□□□□ -1.51
RELA-226ENST00000612991 INE1O15225 51 aa5.62□□□□□ -1.51
RELA-226ENST00000612991 KRTAP5-5Q701N2 237 aaPredicted RBP5.49□□□□□ -1.53
RELA-226ENST00000612991 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
RELA-226ENST00000612991 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
RELA-226ENST00000612991 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
RELA-226ENST00000612991 MT1AP04731 61 aa5.33□□□□□ -1.56
RELA-226ENST00000612991 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
RELA-226ENST00000612991 KRTAP5-4Q6L8H1 288 aa5.26□□□□□ -1.57
RELA-226ENST00000612991 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
RELA-226ENST00000612991 MT4P47944 62 aa5.16□□□□□ -1.58
RELA-226ENST00000612991 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
RELA-226ENST00000612991 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
RELA-226ENST00000612991 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
RELA-226ENST00000612991 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
RELA-226ENST00000612991 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
RELA-226ENST00000612991 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
RELA-226ENST00000612991 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
RELA-226ENST00000612991 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
RELA-226ENST00000612991 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
RELA-226ENST00000612991 MT3P25713 68 aa4.82□□□□□ -1.64
RELA-226ENST00000612991 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
RELA-226ENST00000612991 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
RELA-226ENST00000612991 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
RELA-226ENST00000612991 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
RELA-226ENST00000612991 PRM1P04553 51 aa4.46□□□□□ -1.7
RELA-226ENST00000612991 AHNAK2Q8IVF2 5795 aa4.45□□□□□ -1.7
RELA-226ENST00000612991 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
RELA-226ENST00000612991 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
RELA-226ENST00000612991 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
RELA-226ENST00000612991 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
RELA-226ENST00000612991 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
RELA-226ENST00000612991 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
RELA-226ENST00000612991 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
RELA-226ENST00000612991 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
RELA-226ENST00000612991 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
RELA-226ENST00000612991 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
RELA-226ENST00000612991 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
RELA-226ENST00000612991 KRTAP5-7Q6L8G8 165 aa3.96□□□□□ -1.78
RELA-226ENST00000612991 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
RELA-226ENST00000612991 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
RELA-226ENST00000612991 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
RELA-226ENST00000612991 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
RELA-226ENST00000612991 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.85
RELA-226ENST00000612991 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
RELA-226ENST00000612991 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
RELA-226ENST00000612991 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
RELA-226ENST00000612991 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
RELA-226ENST00000612991 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
RELA-226ENST00000612991 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
RELA-226ENST00000612991 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 16.1 ms