RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 KRTAP6-3Q3LI67 103 aa7.32□□□□□ -1.24
SRRM3-205ENST00000612155 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
SRRM3-205ENST00000612155 KRTAP19-5Q3LI72 72 aa7.29□□□□□ -1.24
SRRM3-205ENST00000612155 KRTAP5-9P26371 169 aa7.26□□□□□ -1.25
SRRM3-205ENST00000612155 MDN1Q9NU22 5596 aa7.26□□□□□ -1.25
SRRM3-205ENST00000612155 KRTAP19-7Q3SYF9 63 aa7.21□□□□□ -1.26
SRRM3-205ENST00000612155 MT1EP04732 61 aa7.09□□□□□ -1.27
SRRM3-205ENST00000612155 SPRR2EP22531 72 aa7.02□□□□□ -1.29
SRRM3-205ENST00000612155 SPRR2BP35325 72 aa7.02□□□□□ -1.29
SRRM3-205ENST00000612155 SPRR2AP35326 72 aa7.02□□□□□ -1.29
SRRM3-205ENST00000612155 LCE1AQ5T7P2 110 aa7□□□□□ -1.29
SRRM3-205ENST00000612155 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.29
SRRM3-205ENST00000612155 NEBP20929 6669 aa6.95□□□□□ -1.3
SRRM3-205ENST00000612155 MT1LQ93083 61 aa6.89□□□□□ -1.31
SRRM3-205ENST00000612155 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
SRRM3-205ENST00000612155 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
SRRM3-205ENST00000612155 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
SRRM3-205ENST00000612155 KRTAP9-6A8MVA2 160 aa6.76□□□□□ -1.33
SRRM3-205ENST00000612155 SPRR2DP22532 72 aa6.76□□□□□ -1.33
SRRM3-205ENST00000612155 MT1GP13640 62 aa6.75□□□□□ -1.33
SRRM3-205ENST00000612155 DSTQ03001 7570 aaKnown RBP6.74□□□□□ -1.33
SRRM3-205ENST00000612155 MT1MQ8N339 61 aa6.71□□□□□ -1.33
SRRM3-205ENST00000612155 KRTAP4-3Q9BYR4 195 aa6.68□□□□□ -1.34
SRRM3-205ENST00000612155 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
SRRM3-205ENST00000612155 LCE3BQ5TA77 95 aa6.52□□□□□ -1.36
SRRM3-205ENST00000612155 KRTAP20-1Q3LI63 56 aa6.52□□□□□ -1.37
SRRM3-205ENST00000612155 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
SRRM3-205ENST00000612155 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
SRRM3-205ENST00000612155 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.38
SRRM3-205ENST00000612155 KRTAP2-2Q9BYT5 123 aa6.32□□□□□ -1.4
SRRM3-205ENST00000612155 KRTAP2-1Q9BYU5 128 aa6.32□□□□□ -1.4
SRRM3-205ENST00000612155 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
SRRM3-205ENST00000612155 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
SRRM3-205ENST00000612155 KRTAP5-4Q6L8H1 288 aa5.96□□□□□ -1.46
SRRM3-205ENST00000612155 MT4P47944 62 aa5.95□□□□□ -1.46
SRRM3-205ENST00000612155 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
SRRM3-205ENST00000612155 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
SRRM3-205ENST00000612155 SYNE1Q8NF91 8797 aaKnown RBP5.86□□□□□ -1.47
SRRM3-205ENST00000612155 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
SRRM3-205ENST00000612155 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
SRRM3-205ENST00000612155 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.47
SRRM3-205ENST00000612155 MT1AP04731 61 aa5.82□□□□□ -1.48
SRRM3-205ENST00000612155 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
SRRM3-205ENST00000612155 KRTAP20-2Q3LI61 65 aa5.63□□□□□ -1.51
SRRM3-205ENST00000612155 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
SRRM3-205ENST00000612155 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
SRRM3-205ENST00000612155 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
SRRM3-205ENST00000612155 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
SRRM3-205ENST00000612155 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
SRRM3-205ENST00000612155 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
SRRM3-205ENST00000612155 MT3P25713 68 aa5.28□□□□□ -1.56
SRRM3-205ENST00000612155 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
SRRM3-205ENST00000612155 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
SRRM3-205ENST00000612155 GPR98Q8WXG9 6306 aa5.09□□□□□ -1.59
SRRM3-205ENST00000612155 KRTAP5-10Q6L8G5 202 aa5.08□□□□□ -1.6
SRRM3-205ENST00000612155 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
SRRM3-205ENST00000612155 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
SRRM3-205ENST00000612155 LCE1EQ5T753 118 aa4.78□□□□□ -1.64
SRRM3-205ENST00000612155 PRM1P04553 51 aa4.77□□□□□ -1.65
SRRM3-205ENST00000612155 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
SRRM3-205ENST00000612155 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.65
SRRM3-205ENST00000612155 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
SRRM3-205ENST00000612155 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
SRRM3-205ENST00000612155 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
SRRM3-205ENST00000612155 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.7
SRRM3-205ENST00000612155 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
SRRM3-205ENST00000612155 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
SRRM3-205ENST00000612155 LCE1CQ5T751 118 aa4.34□□□□□ -1.72
SRRM3-205ENST00000612155 AHNAKQ09666 5890 aaKnown RBP4.12□□□□□ -1.75
SRRM3-205ENST00000612155 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
SRRM3-205ENST00000612155 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.78
SRRM3-205ENST00000612155 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
SRRM3-205ENST00000612155 KRTAP21-2Q3LI59 83 aa3.82□□□□□ -1.8
SRRM3-205ENST00000612155 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
SRRM3-205ENST00000612155 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
SRRM3-205ENST00000612155 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
SRRM3-205ENST00000612155 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
SRRM3-205ENST00000612155 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 64.8 ms