RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
CBWD1-220ENST00000612045 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
CBWD1-220ENST00000612045 KMT2DO14686 5537 aa4.85□□□□□ -1.63
CBWD1-220ENST00000612045 FCGBPQ9Y6R7 5405 aaPredicted RBP4.84□□□□□ -1.64
CBWD1-220ENST00000612045 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
CBWD1-220ENST00000612045 LCE3AQ5TA76 89 aa4.82□□□□□ -1.64
CBWD1-220ENST00000612045 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
CBWD1-220ENST00000612045 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
CBWD1-220ENST00000612045 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
CBWD1-220ENST00000612045 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
CBWD1-220ENST00000612045 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
CBWD1-220ENST00000612045 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
CBWD1-220ENST00000612045 MT1EP04732 61 aa4.47□□□□□ -1.69
CBWD1-220ENST00000612045 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
CBWD1-220ENST00000612045 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
CBWD1-220ENST00000612045 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
CBWD1-220ENST00000612045 MT1LQ93083 61 aa4.38□□□□□ -1.71
CBWD1-220ENST00000612045 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
CBWD1-220ENST00000612045 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
CBWD1-220ENST00000612045 KRTAP5-9P26371 169 aa4.34□□□□□ -1.71
CBWD1-220ENST00000612045 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
CBWD1-220ENST00000612045 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
CBWD1-220ENST00000612045 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
CBWD1-220ENST00000612045 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
CBWD1-220ENST00000612045 MT1GP13640 62 aa4.25□□□□□ -1.73
CBWD1-220ENST00000612045 MT1MQ8N339 61 aa4.21□□□□□ -1.74
CBWD1-220ENST00000612045 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
CBWD1-220ENST00000612045 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
CBWD1-220ENST00000612045 SPRR2EP22531 72 aa4.16□□□□□ -1.74
CBWD1-220ENST00000612045 SPRR2BP35325 72 aa4.16□□□□□ -1.74
CBWD1-220ENST00000612045 SPRR2AP35326 72 aa4.16□□□□□ -1.74
CBWD1-220ENST00000612045 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
CBWD1-220ENST00000612045 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
CBWD1-220ENST00000612045 NEBP20929 6669 aa4.11□□□□□ -1.75
CBWD1-220ENST00000612045 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
CBWD1-220ENST00000612045 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
CBWD1-220ENST00000612045 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
CBWD1-220ENST00000612045 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
CBWD1-220ENST00000612045 SPRR2DP22532 72 aa4□□□□□ -1.77
CBWD1-220ENST00000612045 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
CBWD1-220ENST00000612045 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
CBWD1-220ENST00000612045 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
CBWD1-220ENST00000612045 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
CBWD1-220ENST00000612045 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
CBWD1-220ENST00000612045 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
CBWD1-220ENST00000612045 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
CBWD1-220ENST00000612045 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
CBWD1-220ENST00000612045 MT1AP04731 61 aa3.71□□□□□ -1.82
CBWD1-220ENST00000612045 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
CBWD1-220ENST00000612045 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
CBWD1-220ENST00000612045 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
CBWD1-220ENST00000612045 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
CBWD1-220ENST00000612045 MT3P25713 68 aa3.49□□□□□ -1.85
CBWD1-220ENST00000612045 MT4P47944 62 aa3.49□□□□□ -1.85
CBWD1-220ENST00000612045 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
CBWD1-220ENST00000612045 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
CBWD1-220ENST00000612045 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.86
CBWD1-220ENST00000612045 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
CBWD1-220ENST00000612045 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
CBWD1-220ENST00000612045 INE1O15225 51 aa3.35□□□□□ -1.87
CBWD1-220ENST00000612045 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
CBWD1-220ENST00000612045 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
CBWD1-220ENST00000612045 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
CBWD1-220ENST00000612045 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
CBWD1-220ENST00000612045 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
CBWD1-220ENST00000612045 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
CBWD1-220ENST00000612045 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
CBWD1-220ENST00000612045 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
CBWD1-220ENST00000612045 PRM1P04553 51 aa2.75□□□□□ -1.97
CBWD1-220ENST00000612045 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
CBWD1-220ENST00000612045 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CBWD1-220ENST00000612045 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
CBWD1-220ENST00000612045 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
CBWD1-220ENST00000612045 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
CBWD1-220ENST00000612045 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
CBWD1-220ENST00000612045 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CBWD1-220ENST00000612045 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
CBWD1-220ENST00000612045 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 36.6 ms