RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 TMEM258P61165 79 aa4.66□□□□□ -1.66
FAM228B-207ENST00000611917 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
FAM228B-207ENST00000611917 TNP1P09430 55 aa4.62□□□□□ -1.67
FAM228B-207ENST00000611917 UQCR11O14957 56 aa4.61□□□□□ -1.67
FAM228B-207ENST00000611917 MT1EP04732 61 aa4.61□□□□□ -1.67
FAM228B-207ENST00000611917 KRTAP19-3Q7Z4W3 81 aa4.59□□□□□ -1.67
FAM228B-207ENST00000611917 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
FAM228B-207ENST00000611917 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
FAM228B-207ENST00000611917 MT1GP13640 62 aa4.55□□□□□ -1.68
FAM228B-207ENST00000611917 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
FAM228B-207ENST00000611917 V9GYY9 64 aa4.5□□□□□ -1.69
FAM228B-207ENST00000611917 K7ERS5 55 aa4.48□□□□□ -1.69
FAM228B-207ENST00000611917 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
FAM228B-207ENST00000611917 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
FAM228B-207ENST00000611917 PCP4P48539 62 aa4.45□□□□□ -1.7
FAM228B-207ENST00000611917 MT1LQ93083 61 aa4.42□□□□□ -1.7
FAM228B-207ENST00000611917 Q1T7F1 81 aa4.39□□□□□ -1.71
FAM228B-207ENST00000611917 MT1MQ8N339 61 aa4.39□□□□□ -1.71
FAM228B-207ENST00000611917 PSPHP1O15172 72 aa4.38□□□□□ -1.71
FAM228B-207ENST00000611917 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
FAM228B-207ENST00000611917 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
FAM228B-207ENST00000611917 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
FAM228B-207ENST00000611917 A6NED7 52 aa4.27□□□□□ -1.73
FAM228B-207ENST00000611917 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
FAM228B-207ENST00000611917 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
FAM228B-207ENST00000611917 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
FAM228B-207ENST00000611917 MT4P47944 62 aa4.2□□□□□ -1.74
FAM228B-207ENST00000611917 CDC42SE1Q9NRR8 79 aa4.17□□□□□ -1.74
FAM228B-207ENST00000611917 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
FAM228B-207ENST00000611917 ROMO1P60602 79 aa4.1□□□□□ -1.75
FAM228B-207ENST00000611917 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
FAM228B-207ENST00000611917 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.76
FAM228B-207ENST00000611917 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.77
FAM228B-207ENST00000611917 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
FAM228B-207ENST00000611917 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
FAM228B-207ENST00000611917 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
FAM228B-207ENST00000611917 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
FAM228B-207ENST00000611917 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
FAM228B-207ENST00000611917 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
FAM228B-207ENST00000611917 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
FAM228B-207ENST00000611917 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
FAM228B-207ENST00000611917 MT1AP04731 61 aa3.78□□□□□ -1.8
FAM228B-207ENST00000611917 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
FAM228B-207ENST00000611917 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
FAM228B-207ENST00000611917 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
FAM228B-207ENST00000611917 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
FAM228B-207ENST00000611917 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
FAM228B-207ENST00000611917 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
FAM228B-207ENST00000611917 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
FAM228B-207ENST00000611917 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
FAM228B-207ENST00000611917 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
FAM228B-207ENST00000611917 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
FAM228B-207ENST00000611917 MT3P25713 68 aa3.52□□□□□ -1.85
FAM228B-207ENST00000611917 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
FAM228B-207ENST00000611917 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
FAM228B-207ENST00000611917 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
FAM228B-207ENST00000611917 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
FAM228B-207ENST00000611917 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
FAM228B-207ENST00000611917 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
FAM228B-207ENST00000611917 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
FAM228B-207ENST00000611917 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
FAM228B-207ENST00000611917 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
FAM228B-207ENST00000611917 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
FAM228B-207ENST00000611917 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
FAM228B-207ENST00000611917 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
FAM228B-207ENST00000611917 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
FAM228B-207ENST00000611917 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
FAM228B-207ENST00000611917 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
FAM228B-207ENST00000611917 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
FAM228B-207ENST00000611917 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
FAM228B-207ENST00000611917 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
FAM228B-207ENST00000611917 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
FAM228B-207ENST00000611917 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
FAM228B-207ENST00000611917 INE1O15225 51 aa2.22□□□□□ -2.05
FAM228B-207ENST00000611917 PRM1P04553 51 aa2.06□□□□□ -2.08
FAM228B-207ENST00000611917 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
FAM228B-207ENST00000611917 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
FAM228B-207ENST00000611917 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 76.9 ms