RNA–Protein interactions for RNA: ENST00000611390.1

CDK13-206, Transcript of cyclin dependent kinase 13, humanhuman

TSL 5 BASIC

Gene CDK13, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-206ENST00000611390 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
CDK13-206ENST00000611390 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
CDK13-206ENST00000611390 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
CDK13-206ENST00000611390 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
CDK13-206ENST00000611390 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
CDK13-206ENST00000611390 KMT2DO14686 5537 aa4.36□□□□□ -1.71
CDK13-206ENST00000611390 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
CDK13-206ENST00000611390 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
CDK13-206ENST00000611390 MT1EP04732 61 aa4.26□□□□□ -1.73
CDK13-206ENST00000611390 MT1LQ93083 61 aa4.22□□□□□ -1.73
CDK13-206ENST00000611390 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
CDK13-206ENST00000611390 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
CDK13-206ENST00000611390 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.74
CDK13-206ENST00000611390 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
CDK13-206ENST00000611390 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
CDK13-206ENST00000611390 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
CDK13-206ENST00000611390 MT1GP13640 62 aa4.02□□□□□ -1.77
CDK13-206ENST00000611390 MT1MQ8N339 61 aa3.99□□□□□ -1.77
CDK13-206ENST00000611390 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
CDK13-206ENST00000611390 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
CDK13-206ENST00000611390 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
CDK13-206ENST00000611390 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
CDK13-206ENST00000611390 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
CDK13-206ENST00000611390 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
CDK13-206ENST00000611390 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
CDK13-206ENST00000611390 INE1O15225 51 aa3.88□□□□□ -1.79
CDK13-206ENST00000611390 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
CDK13-206ENST00000611390 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
CDK13-206ENST00000611390 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
CDK13-206ENST00000611390 SPRR2EP22531 72 aa3.69□□□□□ -1.82
CDK13-206ENST00000611390 SPRR2BP35325 72 aa3.69□□□□□ -1.82
CDK13-206ENST00000611390 SPRR2AP35326 72 aa3.69□□□□□ -1.82
CDK13-206ENST00000611390 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
CDK13-206ENST00000611390 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
CDK13-206ENST00000611390 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
CDK13-206ENST00000611390 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
CDK13-206ENST00000611390 MT1AP04731 61 aa3.58□□□□□ -1.84
CDK13-206ENST00000611390 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
CDK13-206ENST00000611390 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
CDK13-206ENST00000611390 SPRR2DP22532 72 aa3.55□□□□□ -1.84
CDK13-206ENST00000611390 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
CDK13-206ENST00000611390 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
CDK13-206ENST00000611390 NEBP20929 6669 aa3.29□□□□□ -1.88
CDK13-206ENST00000611390 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
CDK13-206ENST00000611390 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
CDK13-206ENST00000611390 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
CDK13-206ENST00000611390 MT3P25713 68 aa3.22□□□□□ -1.89
CDK13-206ENST00000611390 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.89
CDK13-206ENST00000611390 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
CDK13-206ENST00000611390 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
CDK13-206ENST00000611390 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
CDK13-206ENST00000611390 MT4P47944 62 aa3.07□□□□□ -1.92
CDK13-206ENST00000611390 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
CDK13-206ENST00000611390 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.93
CDK13-206ENST00000611390 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
CDK13-206ENST00000611390 PRM1P04553 51 aa2.96□□□□□ -1.94
CDK13-206ENST00000611390 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
CDK13-206ENST00000611390 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
CDK13-206ENST00000611390 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
CDK13-206ENST00000611390 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
CDK13-206ENST00000611390 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
CDK13-206ENST00000611390 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
CDK13-206ENST00000611390 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
CDK13-206ENST00000611390 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
CDK13-206ENST00000611390 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
CDK13-206ENST00000611390 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
CDK13-206ENST00000611390 LCE1CQ5T751 118 aa2.54□□□□□ -2
CDK13-206ENST00000611390 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
CDK13-206ENST00000611390 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
CDK13-206ENST00000611390 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
CDK13-206ENST00000611390 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
CDK13-206ENST00000611390 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
CDK13-206ENST00000611390 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
CDK13-206ENST00000611390 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
CDK13-206ENST00000611390 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
CDK13-206ENST00000611390 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
CDK13-206ENST00000611390 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 133.3 ms